6M5V
The coordinate of the hexameric terminase complex in the presence of the adp-bef3
PDB DOI: 10.2210/pdb6m5v/pdb
Classification: VIRAL PROTEIN Organism(s): Human Alphaherpesvirus 1 Strain 17
Deposited: 2020-03-11 Deposition Author(s): Chen, Z.H. , Rao, Z.H. , Wang, N. , Wang, X.X. , Yang, P. , Yang, Y.X. , Zhou, Z.H.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.5 Å
The coordinate of the hexameric terminase complex in the presence of the adp-bef3
Chen, Z.H. , Rao, Z.H. , Wang, N. , Wang, X.X. , Yang, P. , Yang, Y.X. , Zhou, Z.H.
Primary Citation of Related Structures: 6M5V
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Tripartite terminase subunit 3 | A | 690 | Human Alphaherpesvirus 1 Strain 17 | GDALRVPFLDFATATPKRHQTVVPGVGTLHDCCEHSPLFSAVARRLLFNSLVPAQLKGRDFGGDHTAKLEFLAPELVRAVARLRFKECAPADVVPQRNAYYSVLNTFQALHRSEAFRQLVHFVRDFAQLLKTSFRASSLTETTGPPKKRAKVDVATHGRTYGTLELFQKMILMHATYFLAAVLLGDHAEQVNTFLRLVFEIPLFSDAAVRHFRQRATVFLVPRRHGKTWFLVPLIALSLASFRGIKIGYTAHIRKATEPVFEEIDACLRGWFGSARVDHVKGETISFSFPDGSRSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPDAVQTIMGFLNQANCKIIFVSSTNTGKASTSFLYNLRGAADELLNVVTYICDDHMPRVVTHTNATACSCYILNKPVFITMDGAVRRTADLFLADSFMQEIIGGQARETGDDRPVLTKSAGERFLLYRPSTTTNSGLMAPDLYVYVDPAFTANTRASGTGVAVVGRYRDDYIIFALEHFFLRALTGSAPADIARCVVHSLTQVLALHPGAFRGVRVAVEGNSSQDSAVAIATHVHTEMHRLLASEGADAGSGPELLFYHCEPPGSAVLYPFFLLNKQKTPAFEHFIKKFNSGGVMASQEIVSATVRLQTDPVEYLLEQLNNLTETVSPNTDVRTYSGKRNGASDDLMVAVIMAIYLAAQAGPPHT |
| Tripartite terminase subunit 1 | B | 771 | Human Alphaherpesvirus 1 Strain 17 | AAPVSEPTVARQKLLALLGQVQTYVFQIELLRRCDPHIGRGKLPQLKLNALQVRALRRRLRPGLEAQAGAFLTPLSVTLELLLEYAWREGERLLGSLETFATAGDVAAFFTETMGLARPCPYHQRVRLDTYGGTVHMELCFLHDVENFLKQLNYCHLITPSRGATAALERVREFMVGAVGSGLIVPPELSDPSHPCAVCFEELCVTANQGATIASRLADRICNHVTQQAQVRLDANELRRYLPHAAGLSDADRARALSVLDHALARTAGGDGQPHPSPENDSVRKEADALLEAHDVFQATTPGLYAISELQFWLASGDRAGQTTMDAFASNLTALARRELQQETAAVAVELALFGRRAEHFDRAFGSHLAALDMVDALIIGGQATSPDDQIEALIRACYDHHLTTPLLRRLVSPEQCDEEALRRVLARMGAGGAADAPKGGAGPDDDGDRVAVEEGARGLGAPGGGGEDEDRRRGPGGQGPETWGDIATQAAADVRERRRLYADRLTKRSLASLGRCVREQRGELEKMLRVSVHGEVLPATFAAVANGFAARARFCALTAGAGTVIDNRSAPGVFDAHRFMRASLLRHQVDPALLPSITHRFFELVNGPLFDHSTHSFAQPPNTALYYSVENVGLLPHLKEELARFIMGAGGSGADWAVSEFQRFYCFDGISGITPTQRAAWRYIRELIIATTLFASVYRCGELELRRPDCSRPTSEGRYRYPPGVYLTYDSDCPLVAIVESAPDGCIGPRSVVVYDRDVFSILYSVLQHL |
| Tripartite terminase subunit 2 | C | 117 | Human Alphaherpesvirus 1 Strain 17 | LRDTIPDCALRSQTLESLDARYVSRDGAHDAAVWFEDMTPAELEVVFPTTDAKLNYLSRTQRLASLLTYAGPIKAPDDAAAPQTPDTACVHGELLARKRERFAAVINRFLDLHQILR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-03-11 Deposition Author(s): Chen, Z.H. , Rao, Z.H. , Wang, N. , Wang, X.X. , Yang, P. , Yang, Y.X. , Zhou, Z.H.