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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6LVD

Structure of dimethylformamidase, tetramer, y440a mutant

PDB DOI: 10.2210/pdb6lvd/pdb

Classification: HYDROLASE
Organism(s): Paracoccus Sp. Ssg05

Deposited: 2020-02-02
Deposition Author(s): Arya, C.A. , Casanal, A. , Chopra, G. , Fine, J. , Ramanathan, G. , Subramanian, R. , Vinothkumar, K.R. , Yadav, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

6lvd
Literature

Structure of dimethylformamidase, tetramer, y440a mutant

Arya, C.A. , Casanal, A. , Chopra, G. , Fine, J. , Ramanathan, G. , Subramanian, R. , Vinothkumar, K.R. , Yadav, S.

Primary Citation of Related Structures: 6LVD


Proteins
Molecule Chains Sequence Length Organism Sequence
N,N-dimethylformamidase large subunit A 775 Paracoccus Sp. Ssg05 MKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAGPGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFLWSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSDRPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVSADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALGQDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGYGHHGRCMNQPSRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTVPEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYANEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTADGHIDGRGVQYTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDLNDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMYWIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARATQKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVGGGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNGGEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVLNQFIKDEPAPRVKLAAALEHHHHHH
N,N-dimethylformamidase large subunit C 775 Paracoccus Sp. Ssg05 MKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAGPGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFLWSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSDRPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVSADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALGQDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGYGHHGRCMNQPSRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTVPEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYANEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTADGHIDGRGVQYTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDLNDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMYWIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARATQKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVGGGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNGGEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVLNQFIKDEPAPRVKLAAALEHHHHHH
N,N-dimethylformamidase large subunit E 775 Paracoccus Sp. Ssg05 MKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAGPGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFLWSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSDRPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVSADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALGQDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGYGHHGRCMNQPSRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTVPEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYANEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTADGHIDGRGVQYTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDLNDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMYWIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARATQKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVGGGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNGGEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVLNQFIKDEPAPRVKLAAALEHHHHHH
N,N-dimethylformamidase large subunit G 775 Paracoccus Sp. Ssg05 MKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAGPGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFLWSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSDRPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVSADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALGQDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGYGHHGRCMNQPSRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTVPEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYANEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTADGHIDGRGVQYTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDLNDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMYWIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARATQKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVGGGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNGGEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVLNQFIKDEPAPRVKLAAALEHHHHHH
N,N-dimethylformamidase small subunit B 132 Paracoccus Sp. Ssg05 MTEASESCVRDPSNYRDRSADWYAFYDERRRKEIIDIIDEHPEIVEEHAANPFGYRKHPSPYLQRVHNYFRMQPTFGRYYIYSEREWDAYRIATIREFGELPELGDERFKTEEEAMHAVFLRRIEDVRAELA
N,N-dimethylformamidase small subunit D 132 Paracoccus Sp. Ssg05 MTEASESCVRDPSNYRDRSADWYAFYDERRRKEIIDIIDEHPEIVEEHAANPFGYRKHPSPYLQRVHNYFRMQPTFGRYYIYSEREWDAYRIATIREFGELPELGDERFKTEEEAMHAVFLRRIEDVRAELA
N,N-dimethylformamidase small subunit F 132 Paracoccus Sp. Ssg05 MTEASESCVRDPSNYRDRSADWYAFYDERRRKEIIDIIDEHPEIVEEHAANPFGYRKHPSPYLQRVHNYFRMQPTFGRYYIYSEREWDAYRIATIREFGELPELGDERFKTEEEAMHAVFLRRIEDVRAELA
N,N-dimethylformamidase small subunit H 132 Paracoccus Sp. Ssg05 MTEASESCVRDPSNYRDRSADWYAFYDERRRKEIIDIIDEHPEIVEEHAANPFGYRKHPSPYLQRVHNYFRMQPTFGRYYIYSEREWDAYRIATIREFGELPELGDERFKTEEEAMHAVFLRRIEDVRAELA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-02-02
Deposition Author(s): Arya, C.A. , Casanal, A. , Chopra, G. , Fine, J. , Ramanathan, G. , Subramanian, R. , Vinothkumar, K.R. , Yadav, S.