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FASTA Sequence PDB Format mmCIF Format
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6LHQ

The cryo-em structure of coxsackievirus a16 mature virion in complex with fab na9d7

PDB DOI: 10.2210/pdb6lhq/pdb

Classification: VIRUS
Organism(s): Coxsackievirus A16 , Mus Musculus

Deposited: 2019-12-09
Deposition Author(s): Cheng, T. , He, M.Z. , Li, S.W. , Xu, L.F. , Yin, Z.C. , Zheng, Q.B. , Zhu, R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.06 Å

6lhq
Literature

The cryo-em structure of coxsackievirus a16 mature virion in complex with fab na9d7

Cheng, T. , He, M.Z. , Li, S.W. , Xu, L.F. , Yin, Z.C. , Zheng, Q.B. , Zhu, R.

Primary Citation of Related Structures: 6LHQ


Proteins
Molecule Chains Sequence Length Organism Sequence
VP1 protein A 297 Coxsackievirus A16 , Mus Musculus GDPIADMIDQTVNNQVNRSLTALQVLPTAANTEASSHRLGTGVVPALQAAETGASSNASDKNLIETRCVLNHHSTQETAIGNFFSRAGLVSIITMPTTDTQNTDGYVNWDIDLMGYAQLRRKCELFTYMRFDAEFTFVVAKPNGVLVPQLLQYMYVPPGAPKPTSRDSFAWQTATNPSVFVKMTDPPAQVSVPFMSPASAYQWFYDGYPTFGEHLQANDLDYGQCPNNMMGTFSIRTVGTEKSPHSITLRVYMRIKHVRAWIPRPLRNQPYLFKTNPNYKGNDIKCTSTSRDKITTL
VP2 protein B 254 Coxsackievirus A16 , Mus Musculus SPSAEACGYSDRVAQLTIGNSTITTQEAANIVIAYGEWPEYCPDTDATAVDKPTRPDVSVNRFFTLDTKSWAKDSKGWYWKFPDVLTEVGVFGQNAQFHYLYRSGFCVHVQCNASKFHQGALLVAVLPEYVLGTIAGGTGNENSHPPYATTQPGQVGAVLTHPYVLDAGIPLSQLTVCPHQWINLRTNNCATIIVPYMNTVPFDSALNHCNFGLLVIPVVPLDFNAGATSEIPITVTIAPMCAEFAGLRQAVKQ
VP3 protein C 242 Coxsackievirus A16 , Mus Musculus GIPTELKPGTNQFLTTDDGVSAPILPGFHPTPPIHIPGEVHNLLEICRVETILEVNNLKTNETTPMQRLCFPVSVQSKTGELCAAFRADPGRDGPWQSTILGQLCRYYTQWSGSLEVTFMFAGSFMATGKMLIAYTPPGGNVPADRITAMLGTHVIWDFGLQSSVTLVVPWISNTHYRAHARAGYFDYYTTGIITIWYQTNYVVPIGAPTTAYIVALAAAQDNFTMKLCKDTEDIEQTANIQ
VP4 protein D 69 Coxsackievirus A16 , Mus Musculus MGSQVSTQRSGSHENSNSASEGSTINYTTINYYKDAYAASAGRQDMSQDPKKFTDPVMDVIHEMAPPLK
light chain variable region of Fab NA9D7 L 108 Coxsackievirus A16 , Mus Musculus EIVLTQSPTTMAASPGEKITITCSASSSISSNYLHWYQQKPGFSPKLLIYRTSNLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIPHTFGGGTKLEIK
heavy chain variable region of Fab NA9D7 H 120 Coxsackievirus A16 , Mus Musculus EVQLQQSGPELVKPGASVKMSCKASGYTFTDYYMKWVKQSHGKSLEWIGDINPNNGATSYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVYYCARRGYGLYYAMDYWGQGTSVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-12-09
Deposition Author(s): Cheng, T. , He, M.Z. , Li, S.W. , Xu, L.F. , Yin, Z.C. , Zheng, Q.B. , Zhu, R.