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6LDB
Structure of bifidobacterium dentium beta-glucuronidase complexed with uronic isofagomine
PDB DOI: 10.2210/pdb6ldb/pdb
Classification: HYDROLASE Organism(s): Bifidobacterium Dentium (Strain Atcc 27534 / Dsm 20436 / Jcm 1195 / Bd1)
Deposited: 2019-11-20 Deposition Author(s): Hsieh, T.-J. , Lin, C.-H. , Lin, H.-Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.651 Å
Structure of bifidobacterium dentium beta-glucuronidase complexed with uronic isofagomine
Hsieh, T.-J. , Lin, C.-H. , Lin, H.-Y.
Primary Citation of Related Structures: 6LDB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| LacZ1 Beta-galactosidase | A | 670 | Bifidobacterium Dentium (Strain Atcc 27534 / Dsm 20436 / Jcm 1195 / Bd1) | NGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTPIQPSDPAINHADSSESAESDIQRATTYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANEPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
| LacZ1 Beta-galactosidase | B | 670 | Bifidobacterium Dentium (Strain Atcc 27534 / Dsm 20436 / Jcm 1195 / Bd1) | NGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTPIQPSDPAINHADSSESAESDIQRATTYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANEPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
| LacZ1 Beta-galactosidase | C | 670 | Bifidobacterium Dentium (Strain Atcc 27534 / Dsm 20436 / Jcm 1195 / Bd1) | NGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTPIQPSDPAINHADSSESAESDIQRATTYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANEPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
| LacZ1 Beta-galactosidase | D | 670 | Bifidobacterium Dentium (Strain Atcc 27534 / Dsm 20436 / Jcm 1195 / Bd1) | NGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTPIQPSDPAINHADSSESAESDIQRATTYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANEPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-11-20 Deposition Author(s): Hsieh, T.-J. , Lin, C.-H. , Lin, H.-Y.