Cryo-em structure of echovirus 11 complexed with its attaching receptor cd55 at ph 5.5
PDB DOI: 10.2210/pdb6lao/pdb
Classification: VIRUS Organism(s): Echovirus E11
Deposited: 2019-11-12 Deposition Author(s): Gao, F.G. , Liu, S.
Method: ELECTRON MICROSCOPY Resolution: 2.64 Å
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Capsid protein VP1 | A | 285 | Echovirus E11 | VVEAVENAVARVADTISSGPSNSQAVPALTAVETGHTSQVTPSDTIQTRHVRNYHSRSESSIENFLCRSACVYMGEYHTTNTDTSKLFASWTINARRMVQMRRKLELFTYVRFDMEVTFVITSKQDQGTQLGQDMPPLTHQIMYIPPGGPIPKSVTDYTWQTSTNPSIFWTEGNAPPRMSIPFISIGNAYSNFYDGWSHFSQNGVYGYNTLNHMGQIYVRHVNGSSPLPMTSTVRMYFKPKHVKVWVPRPPRLCQYKNASTVNFTPTNITEKRQSINYIPETVKP |
Capsid protein VP2 | B | 251 | Echovirus E11 | DRVRSITLGNSTITTQESANVVVAYGRWPEYLKDNEATAEDQPTQPDVATCRFYTLESVTWERDSPGWWWKFPDALKDMGLFGQNMYYHYLGRAGYTIHVQCNASKFHQGCLMVVCVPEAEMGCSQVDGTVNEHSLSEGETAKKFASTSTNGTNTVQSIVTNAGMGVGVGNLTIFPHQWINLRTNNCATIVMPYINNVPMDNMFRHHNFTLMIIPFVPLDYSSDSSTYVPITVTVAPMCAEYNGLRLATSL |
Capsid protein VP3 | C | 238 | Echovirus E11 | GLPVMNTPGSNQFLTSDDFQSPSAMPQFDVTPELNIPGEVQNLMEIAEVDSVVPVNNVEGKLDTMEIYRIPVQSGNHQSSQVFGFQVQPGLDNVFKHTLLGEILNYYAHWSGSIKLTFVFCGSAMATGKFLLAYAPPGANAPKSRKDAMLGTHIIWDVGLQSSCVLCIPWISQTHYRLVQQDEYTSAGNVTCWYQTGIVVPAGTPTSCSIMCFVSACNDFSVRLLKDTPFIEQSALLQ |
Capsid protein VP4 | D | 69 | Echovirus E11 | MGAQVSTQKTGAHETGLNASGRSIIHYTNINYYKDAASNSANRQDFSQDPGKFTEPVKDIMVKSLPALN |
Method: ELECTRON MICROSCOPY