Cryo-em structure of echovirus 11 complexed with its attaching receptor cd55 at ph 7.4
PDB DOI: 10.2210/pdb6la5/pdb
Classification: VIRUS Organism(s): Echovirus E11 , Homo Sapiens
Deposited: 2019-11-12 Deposition Author(s): Gao, F.G. , Liu, S.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein VP1 | A | 285 | Echovirus E11 , Homo Sapiens | VVEAVENAVARVADTISSGPSNSQAVPALTAVETGHTSQVTPSDTIQTRHVRNYHSRSESSIENFLCRSACVYMGEYHTTNTDTSKLFASWTINARRMVQMRRKLELFTYVRFDMEVTFVITSKQDQGTQLGQDMPPLTHQIMYIPPGGPIPKSVTDYTWQTSTNPSIFWTEGNAPPRMSIPFISIGNAYSNFYDGWSHFSQNGVYGYNTLNHMGQIYVRHVNGSSPLPMTSTVRMYFKPKHVKVWVPRPPRLCQYKNASTVNFTPTNITEKRQSINYIPETVKP |
| Capsid protein VP2 | B | 251 | Echovirus E11 , Homo Sapiens | DRVRSITLGNSTITTQESANVVVAYGRWPEYLKDNEATAEDQPTQPDVATCRFYTLESVTWERDSPGWWWKFPDALKDMGLFGQNMYYHYLGRAGYTIHVQCNASKFHQGCLMVVCVPEAEMGCSQVDGTVNEHSLSEGETAKKFASTSTNGTNTVQSIVTNAGMGVGVGNLTIFPHQWINLRTNNCATIVMPYINNVPMDNMFRHHNFTLMIIPFVPLDYSSDSSTYVPITVTVAPMCAEYNGLRLATSL |
| Capsid protein VP3 | C | 238 | Echovirus E11 , Homo Sapiens | GLPVMNTPGSNQFLTSDDFQSPSAMPQFDVTPELNIPGEVQNLMEIAEVDSVVPVNNVEGKLDTMEIYRIPVQSGNHQSSQVFGFQVQPGLDNVFKHTLLGEILNYYAHWSGSIKLTFVFCGSAMATGKFLLAYAPPGANAPKSRKDAMLGTHIIWDVGLQSSCVLCIPWISQTHYRLVQQDEYTSAGNVTCWYQTGIVVPAGTPTSCSIMCFVSACNDFSVRLLKDTPFIEQSALLQ |
| Capsid protein VP4 | D | 69 | Echovirus E11 , Homo Sapiens | MGAQVSTQKTGAHETGLNASGRSIIHYTNINYYKDAASNSANRQDFSQDPGKFTEPVKDIMVKSLPALN |
| Complement decay-accelerating factor | E | 125 | Echovirus E11 , Homo Sapiens | KSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG |
Method: ELECTRON MICROSCOPY