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6L8E

Crystal structure of heterohexameric yoeb-yefm complex bound to 26bp-dna

PDB DOI: 10.2210/pdb6l8e/pdb

Classification: ANTITOXIN/TOXIN/DNA
Organism(s): Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct

Deposited: 2019-11-06
Deposition Author(s): Xue, L. , Yue, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.35 Å

6l8e
Literature

Crystal structure of heterohexameric yoeb-yefm complex bound to 26bp-dna

Xue, L. , Yue, J.

Primary Citation of Related Structures: 6L8E


Proteins
Molecule Chains Sequence Length Organism Sequence
YefM Antitoxin A 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin B 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin C 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin D 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin I 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin J 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin K 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YefM Antitoxin L 83 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKDIDV
YoeB toxin E 88 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIKIASCKYHY
YoeB toxin F 88 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIKIASCKYHY
YoeB toxin M 88 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIKIASCKYHY
YoeB toxin N 88 Staphylococcus Aureus Subsp. Aureus Nctc 8325 , Synthetic Construct MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIKIASCKYHY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (26-mer) g 26 NA TTATTGTACAGATATTTGTACAATTG
DNA (26-mer) o 26 NA TTATTGTACAGATATTTGTACAATTG
DNA (26-mer) h 26 NA CAATTGTACAAATATCTGTACAATAA
DNA (26-mer) p 26 NA CAATTGTACAAATATCTGTACAATAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-11-06
Deposition Author(s): Xue, L. , Yue, J.