PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6L2O

Crystal structure of the r.pabi(y68f-k154a)-dsdna(gtac-5bp-gtac) complex

PDB DOI: 10.2210/pdb6l2o/pdb

Classification: HYDROLASE/DNA
Organism(s): Pyrococcus Abyssi (Strain Ge5 / Orsay) , Synthetic Construct

Deposited: 2019-10-05
Deposition Author(s): Ito, T. , Miyazono, K. , Tanokura, M. , Wang, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

Literature

Crystal structure of the r.pabi(y68f-k154a)-dsdna(gtac-5bp-gtac) complex

Ito, T. , Miyazono, K. , Tanokura, M. , Wang, D.

Primary Citation of Related Structures: 6L2O


Proteins
Molecule Chains Sequence Length Organism Sequence
RE_R_Pab1 domain-containing protein A 220 Pyrococcus Abyssi (Strain Ge5 / Orsay) , Synthetic Construct MEASVSFENGKIVVRLPITRPTSKIRVKKIENGVGIPVSTRKKSFPSDENLRDYYIEWQISFARDGKYDYELSRMVRLAHEHGILTYNDIYELLKFADDVKSYLEDKGIRRESTNEELYGFNIYEDVYPVAKKELPSGEFIGIVLKHAQRAVGYQSMVYVCIPLTNVEPSLAGRVARRNEVVKYEVPVDLMKELLKAFIIASETHKNDIVKFLRSIIGTS
RE_R_Pab1 domain-containing protein B 220 Pyrococcus Abyssi (Strain Ge5 / Orsay) , Synthetic Construct MEASVSFENGKIVVRLPITRPTSKIRVKKIENGVGIPVSTRKKSFPSDENLRDYYIEWQISFARDGKYDYELSRMVRLAHEHGILTYNDIYELLKFADDVKSYLEDKGIRRESTNEELYGFNIYEDVYPVAKKELPSGEFIGIVLKHAQRAVGYQSMVYVCIPLTNVEPSLAGRVARRNEVVKYEVPVDLMKELLKAFIIASETHKNDIVKFLRSIIGTS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*A*GP*CP*AP*GP*TP*AP*CP*TP*TP*AP*AP*AP*GP*TP*AP*CP*TP*GP*CP*TP*G)-3') c 23 NA CAGCAGTACTTAAAGTACTGCTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-10-05
Deposition Author(s): Ito, T. , Miyazono, K. , Tanokura, M. , Wang, D.