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FASTA Sequence PDB Format mmCIF Format
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6KSF

Crystal structure of alkbh1 bound to 21-mer dna bulge

PDB DOI: 10.2210/pdb6ksf/pdb

Classification: GENE REGULATION
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2019-08-23
Deposition Author(s): Li, H. , Zhang, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

6ksf
Literature

Crystal structure of alkbh1 bound to 21-mer dna bulge

Li, H. , Zhang, M.

Primary Citation of Related Structures: 6KSF


Proteins
Molecule Chains Sequence Length Organism Sequence
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 1 A 336 Mus Musculus , Synthetic Construct EDAFRKLFRFYRQSRPGTADLGAVIDFSEAHLARSPKPGVPQVVRFPLNVSSVTERDAERVGLEPVSKWRAYGLEGYPGFIFIPNPFLPGCQRHWVKQCLKLYSQKPNVSNLDKHMTKEETQGLWEQSKEVLRSKEVTKRRPRSLLERLRWVTLGYHYNWDSKKYSADHYTPFPSDLAFLSEQVATACGFQGFQAEAGILNYYRLDSTLGIHVDRCELDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSGDIMVMSGFSRLLNHAVPRVLPHPDGESLPHSLETPLPAVLPSNSLVEPSSVEDWQVCATYLRTARVNMTVRQVLATGQDFPL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DCP*DCP*DGP*DCP*DGP*DTP*DGP*DCP*DTP*DGP*DGP*DAP*DTP*DCP*DC)-3') b 24 NA GCTGAGTGCCCGCGTGCTGGATCC
DNA (5'-D(*DGP*DGP*DAP*DTP*DCP*DCP*DAP*DGP*DCP*DAP*DCP*DGP*DCP*DCP*DAP*DCP*DTP*DCP*DAP*DGP*DC)-3') c 21 NA GGATCCAGCACGCCACTCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-08-23
Deposition Author(s): Li, H. , Zhang, M.