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FASTA Sequence PDB Format mmCIF Format
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6KDV

Crystal structure of ttcas1-dna complex

PDB DOI: 10.2210/pdb6kdv/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct

Deposited: 2019-07-02
Deposition Author(s): Li, J.Z. , Wang, J.Y. , Wang, Y.L. , Yang, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.11 Å

6kdv
Literature

Crystal structure of ttcas1-dna complex

Li, J.Z. , Wang, J.Y. , Wang, Y.L. , Yang, J.

Primary Citation of Related Structures: 6KDV


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas1 2 B 325 Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct MPPVSSARNLKELPKFRDGLSYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVRLLAENGCTVAWVGEGMARFYAQGLGDTRSAARFYRQARAWADPALHLEVVMRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYDRGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFVYDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREAIQEGRLLERMAEDLLNLFRGLGLPEEEDPVEEDPTRPGGLWDLEGEVEGGVAYGGDDPGEGAEEPEG
CRISPR-associated endonuclease Cas1 2 A 325 Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct MPPVSSARNLKELPKFRDGLSYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVRLLAENGCTVAWVGEGMARFYAQGLGDTRSAARFYRQARAWADPALHLEVVMRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYDRGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFVYDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREAIQEGRLLERMAEDLLNLFRGLGLPEEEDPVEEDPTRPGGLWDLEGEVEGGVAYGGDDPGEGAEEPEG
CRISPR-associated endonuclease Cas1 2 D 325 Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct MPPVSSARNLKELPKFRDGLSYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVRLLAENGCTVAWVGEGMARFYAQGLGDTRSAARFYRQARAWADPALHLEVVMRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYDRGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFVYDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREAIQEGRLLERMAEDLLNLFRGLGLPEEEDPVEEDPTRPGGLWDLEGEVEGGVAYGGDDPGEGAEEPEG
CRISPR-associated endonuclease Cas1 2 C 325 Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Synthetic Construct MPPVSSARNLKELPKFRDGLSYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVRLLAENGCTVAWVGEGMARFYAQGLGDTRSAARFYRQARAWADPALHLEVVMRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYDRGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFVYDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREAIQEGRLLERMAEDLLNLFRGLGLPEEEDPVEEDPTRPGGLWDLEGEVEGGVAYGGDDPGEGAEEPEG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*GP*TP*CP*GP*AP*TP*GP*CP*TP*GP*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') e 23 NA GAGTCGATGCTGGTTTTTTTTTT
DNA (5'-D(*GP*AP*GP*TP*CP*GP*AP*TP*GP*CP*TP*GP*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') g 23 NA GAGTCGATGCTGGTTTTTTTTTT
DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*CP*CP*AP*GP*CP*AP*TP*CP*GP*AP*CP*TP*C)-3') f 23 NA TTTTTTTTTTCCAGCATCGACTC
DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*CP*CP*AP*GP*CP*AP*TP*CP*GP*AP*CP*TP*C)-3') h 23 NA TTTTTTTTTTCCAGCATCGACTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-02
Deposition Author(s): Li, J.Z. , Wang, J.Y. , Wang, Y.L. , Yang, J.