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6KDB

Crystal structure of human dnmt3b-dnmt3l in complex with dna containing cpgpt site

PDB DOI: 10.2210/pdb6kdb/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-07-01
Deposition Author(s): Chen, Y.-P. , Lin, C.-C. , Shen, C.-K. , Yang, W.-Z. , Yuan, H.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.862 Å

6kdb
Literature

Crystal structure of human dnmt3b-dnmt3l in complex with dna containing cpgpt site

Chen, Y.-P. , Lin, C.-C. , Shen, C.-K. , Yang, W.-Z. , Yuan, H.S.

Primary Citation of Related Structures: 6KDB


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA (cytosine-5)-methyltransferase 3B A 286 Homo Sapiens , Synthetic Construct GHMRRRPIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITKKNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRARYFWGNLPGMNRPVIASKNDKLELQDCLEYNRIAKLKKVQTITTKSNSIKQGKNQLFPVVMNGKEDVLWCTELERIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFACE
DNA (cytosine-5)-methyltransferase 3B D 286 Homo Sapiens , Synthetic Construct GHMRRRPIRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAVGTVKHEGNIKYVNDVRNITKKNIEEWGPFDLVIGGSPCNDLSNVNPARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRARYFWGNLPGMNRPVIASKNDKLELQDCLEYNRIAKLKKVQTITTKSNSIKQGKNQLFPVVMNGKEDVLWCTELERIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFACE
DNA (cytosine-5)-methyltransferase 3-like B 204 Homo Sapiens , Synthetic Construct GHMFETVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRHWALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFS
DNA (cytosine-5)-methyltransferase 3-like C 204 Homo Sapiens , Synthetic Construct GHMFETVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRHWALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (25-MER) e 25 NA GCATGCGTTCTAATTAGAACGCATG
DNA (25-MER) f 25 NA GCATGCGTTCTAATTAGAACGCATG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-07-01
Deposition Author(s): Chen, Y.-P. , Lin, C.-C. , Shen, C.-K. , Yang, W.-Z. , Yuan, H.S.