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FASTA Sequence PDB Format mmCIF Format
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6K4S

Crystal structure of xcas9 in complex with sgrna and dna (tgc pam)

PDB DOI: 10.2210/pdb6k4s/pdb

Classification: HYDROLASE/DNA/RNA
Organism(s): Streptococcus Pyogenes Serotype M1 , Synthetic Construct

Deposited: 2019-05-26
Deposition Author(s): Chen, W. , Gan, J. , Ji, Q. , Wang, Y. , Zhang, H. , Zhang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.01 Å

Literature

Crystal structure of xcas9 in complex with sgrna and dna (tgc pam)

Chen, W. , Gan, J. , Ji, Q. , Wang, Y. , Zhang, H. , Zhang, Y.

Primary Citation of Related Structures: 6K4S


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9/Csn1 B 1368 Streptococcus Pyogenes Serotype M1 , Synthetic Construct MDKKYSIGLAIGTNSVGWAVITDEYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRILYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDTKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKLYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGIIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEKVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGDQKKAIVDLLFKTNRKVTVKQLKEDYFKKIEEFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFIQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDAIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGVLQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA a 83 NA GGAUAACUCAAUUUGUAAAAAAGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUG
targeted DNA c 28 NA CAATAGCATTTTTTACAAATTGAGTTAT
non-targeted DNA d 12 NA AAAATGCTATTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-05-26
Deposition Author(s): Chen, W. , Gan, J. , Ji, Q. , Wang, Y. , Zhang, H. , Zhang, Y.