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FASTA Sequence PDB Format mmCIF Format
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6JYL

The crosslinked complex of iswi-nucleosome in the adp.bef-bound state

PDB DOI: 10.2210/pdb6jyl/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis

Deposited: 2019-04-26
Deposition Author(s): Chen, Z.C. , Gao, N. , Li, X.M. , Wu, H. , Yan, L.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.37 Å

Literature

The crosslinked complex of iswi-nucleosome in the adp.bef-bound state

Chen, Z.C. , Gao, N. , Li, X.M. , Wu, H. , Yan, L.J.

Primary Citation of Related Structures: 6JYL


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3 A 135 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3 E 135 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 102 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A C 129 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2A G 129 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSAKSK
Histone H2B 1.1 D 122 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B 1.1 H 122 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
ISWI chromatin-remodeling complex ATPase ISW1 K 1061 Escherichia Coli K-12 , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Xenopus Laevis ENLKPFQVGLPPHDPESNKKRYLLKDANGKKFDLEGTTKRFEHLLSLSGLFKHFIESKAAKDPKFRQVLDVLEENKANGKGKGKHQDVRRRKTEHEEDAELLKEEDSDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHGAADVFKSGTSTGSAGTPEPGSGEKGDDIDLDELLLKSENKTKSLNAKYETLGLDDLQKFNQDSAYEWNGQDFKKKIQRDIISPLLLNPTKRERKENYSIDNYYKDVLNTGRSSTPSHPRMPKPHVFHSHQLQPPQLKVLYEKERMWTAKKTGYVPTMDDVKAAYGDISDEEEKKQKLELLKLSVNNSQPLTEEEEKMKADWESEGFTNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEEKIKRVKMQQEALRRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLLQCLEKEFNAGIVLDDATKDRMKKEDENGKRIREEFADQTANEKENVDGVESKKAKIEDTSNVGTEQLVAEKIPENETTH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (167-MER) i 167 NA CTCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCGATAGCTTGTCGAGAAGTACTAG
DNA (167-MER) j 167 NA CTAGTACTTCTCGACAAGCTATCGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGAG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-04-26
Deposition Author(s): Chen, Z.C. , Gao, N. , Li, X.M. , Wu, H. , Yan, L.J.