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FASTA Sequence PDB Format mmCIF Format
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6JXD

Human nucleosome core particle with cohesive end dna termini

PDB DOI: 10.2210/pdb6jxd/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens

Deposited: 2019-04-23
Deposition Author(s): Davey, C.A. , Defalco, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å

6jxd
Literature

Human nucleosome core particle with cohesive end dna termini

Davey, C.A. , Defalco, L.

Primary Citation of Related Structures: 6JXD


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 98 Homo Sapiens PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 82 Homo Sapiens VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 107 Homo Sapiens RKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPK
Histone H2B type 1-J D 97 Homo Sapiens RKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-J H 97 Homo Sapiens RKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H3.1 E 97 Homo Sapiens PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Histone H4 F 87 Homo Sapiens KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E G 106 Homo Sapiens KAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (147-MER) i 147 NA CATATATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCTACCGCGTTTTAACCGCCACTAGAAGCGCTTACTAGTCTCCAGGCACGTGTGAGACCGGCATATATGGTAC
DNA (147-MER) j 147 NA CATATATGCCGGTCTCACACGTGCCTGGAGACTAGTAAGCGCTTCTAGTGGCGGTTAAAACGCGGTAGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATATATGGTAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-04-23
Deposition Author(s): Davey, C.A. , Defalco, L.