6JI2
Crystal structure of archaeal ribosomal protein ap1, apelota, and gtp-bound aef1a complex
PDB DOI: 10.2210/pdb6ji2/pdb
Classification: TRANSLATION Organism(s): Aeropyrum Pernix K1 , Synthetic Construct
Deposited: 2019-02-20 Deposition Author(s): Imai, H. , Ishino, S. , Ishino, Y. , Ito, K. , Kawamura, M. , Maruyama, K. , Uchiumi, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
Crystal structure of archaeal ribosomal protein ap1, apelota, and gtp-bound aef1a complex
Imai, H. , Ishino, S. , Ishino, Y. , Ito, K. , Kawamura, M. , Maruyama, K. , Uchiumi, T.
Primary Citation of Related Structures: 6JI2
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Elongation factor 1-alpha | A | 447 | Aeropyrum Pernix K1 , Synthetic Construct | GSHMAEKPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGHLDKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVKPAKVDIKAKLARGSGC |
| Elongation factor 1-alpha | E | 447 | Aeropyrum Pernix K1 , Synthetic Construct | GSHMAEKPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGHLDKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVKPAKVDIKAKLARGSGC |
| Protein pelota homolog | B | 376 | Aeropyrum Pernix K1 , Synthetic Construct | MGSSHHHHHHSSGLVPRGSHMRVEVLDNKRRIVRLRPESEEDLWLLRITLRPGDVVRIRTSRDVPVGSGRKERVVMTLRIRLDSIEFQPFTGKLRISGIVVEGPDEFGVKGRRHSTAVSIGTWLVVERDKGWSEQELERLASGRARGTAVIAAVDYDEFALAVLAGHGMKILEDTSARLPGKDDPSREQEVEKYVDRAAKRIVEEAARHRSPIAVIAGPGQLKTSVAEKVQRAMPSLKVATVDTSMGGVAGVREALRRESVTRILRELSIVEAEGVLEEFLRRIAKSRDTVAYTPGEVLAVARMGAVDTVLLVDTLLHSPDDAVREAVDEALRLVESMGGRVIIIPGDSPAGERLVSFGGVIALLRYPVPQEARRL |
| Protein pelota homolog | F | 376 | Aeropyrum Pernix K1 , Synthetic Construct | MGSSHHHHHHSSGLVPRGSHMRVEVLDNKRRIVRLRPESEEDLWLLRITLRPGDVVRIRTSRDVPVGSGRKERVVMTLRIRLDSIEFQPFTGKLRISGIVVEGPDEFGVKGRRHSTAVSIGTWLVVERDKGWSEQELERLASGRARGTAVIAAVDYDEFALAVLAGHGMKILEDTSARLPGKDDPSREQEVEKYVDRAAKRIVEEAARHRSPIAVIAGPGQLKTSVAEKVQRAMPSLKVATVDTSMGGVAGVREALRRESVTRILRELSIVEAEGVLEEFLRRIAKSRDTVAYTPGEVLAVARMGAVDTVLLVDTLLHSPDDAVREAVDEALRLVESMGGRVIIIPGDSPAGERLVSFGGVIALLRYPVPQEARRL |
| Archaeal ribosomal stalk protein aP1 | X | 17 | Aeropyrum Pernix K1 , Synthetic Construct | KKEEEVDLSGLSGMFGF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-02-20 Deposition Author(s): Imai, H. , Ishino, S. , Ishino, Y. , Ito, K. , Kawamura, M. , Maruyama, K. , Uchiumi, T.