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FASTA Sequence PDB Format mmCIF Format
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6IQW

Cryo-em structure of csm effector complex

PDB DOI: 10.2210/pdb6iqw/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Thermococcus Onnurineus (Strain Na1)

Deposited: 2018-11-09
Deposition Author(s): Dong, Q. , Huo, Y. , Jiang, T. , Li, T. , Wang, N. , Wang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.35 Å

6iqw
Literature

Cryo-em structure of csm effector complex

Dong, Q. , Huo, Y. , Jiang, T. , Li, T. , Wang, N. , Wang, X.

Primary Citation of Related Structures: 6IQW


Proteins
Molecule Chains Sequence Length Organism Sequence
Csm1 A 777 Thermococcus Onnurineus (Strain Na1) MEIDELTALGGLLHDIGKPVQRAGLYSGDHSTQGARFLRDLAENTGRAEYELLSLFSEFHHKGHMKNDELMIRRIKELSPERFGLTMEDVLNALWIVYEADNLASGEREEGQPQASRPLYSVFNPGKAYPWAELDFEKELPVPGDVFSIRSQDYRELVKRLWEELSKAKLRSDRLLPVLEKYLTFVSSVTSEGNIISLYDHMRMTSAIALAMLRAGCTAEDVRSGRCRKEKRFLLIEGDFSGIQDFIYRVSGKGTLKYLRARSAYLELIGWDVVLEILSRLGLTRANVVFNAGGHFMIIAQNTPDAVKELEEIRAKAVEWLYREFESDLYLAIEWEPVSGREFGREGGKNLFAEARKRLKHKLTVRKLKRFGEIKGLFEHGHTERLAECPVCGRELPEGKLEPSASDPETKVCPTCNRLVSLGGNLPKLLGFGRTAKNDAGVLVEGPFSGFVPYLQGGRPVGEQILVKNTLNPGEIPESAQFVPYFVADYFKKDPKGGVATFEELSMASTGTRRLGVMKGDVDRLGEFFSSMDSPSKLATASRFMDYFFKGYIGAIIEGKFGYIIGDVPSLRDWPEEPDIVVVYAGGDDFFIVGAWDQIFELAFRVRRAFNAYTGGKLTLSVGLGYFDERTPIYRMADVVSERLDTAKDEGRNRVFVVGRSRPLDGKHKLSYEWNHYEELWRTYAPRIYAGNGRLKGKLESKKGLLWKLLEIRELYVRDPNDVRWAYLTAYLLGRHGLSDLFPELVGIDTKAVERKEPQPVYWVDGVLKIVLMAVRR
Csm2 B 196 Thermococcus Onnurineus (Strain Na1) MHHHHHHVIFVAYHQKHGGYGRGGYGRQDRPQVDASRLFGESPDVVGIKKMLEGKGKQWEAIQPYFDNVVREAKNFLEWSPNKRLANAVTVAAYLTSQGLKTNQVRKILDMARTTELKVKRGEGDIKDDLVKMRYLLAYTVGKATGQSKYSLDAFHRILDPMLEVLMGSPKKENFEKFYDFLQAVVAYHKFFGGGD
Csm3 C 290 Thermococcus Onnurineus (Strain Na1) MDRRFYGKIVIKGKIKAVTGLHIGSQRDISEIGGIDNPVIKDPHTGLPYIPGSSLKGRLRSLFEILVNSRLGEWREKYPSLANYSPGSCRPDNQENCGKFFNRKINRGWIHVCPDYETALACPVCRLFGASGKESNFPSRIIVRDAFLTKEWEEKWRAGEAITEAKIEVGIDRVTSQANPRTNERVVAGAEFEFEIIYNVENTTHWRDDIKNLLTAMALLEDSYLGGSGSRGYGKVKFIFDSFEFRPLDYYRTGKDEDIVSIDAREKSVSDILSGFDSLFSEVEGKLEAG
Csm3 D 290 Thermococcus Onnurineus (Strain Na1) MDRRFYGKIVIKGKIKAVTGLHIGSQRDISEIGGIDNPVIKDPHTGLPYIPGSSLKGRLRSLFEILVNSRLGEWREKYPSLANYSPGSCRPDNQENCGKFFNRKINRGWIHVCPDYETALACPVCRLFGASGKESNFPSRIIVRDAFLTKEWEEKWRAGEAITEAKIEVGIDRVTSQANPRTNERVVAGAEFEFEIIYNVENTTHWRDDIKNLLTAMALLEDSYLGGSGSRGYGKVKFIFDSFEFRPLDYYRTGKDEDIVSIDAREKSVSDILSGFDSLFSEVEGKLEAG
Csm4 E 289 Thermococcus Onnurineus (Strain Na1) MPKFIAVKLIPKGPFRDIPRADTLFGAIGNAISAIHGQSAVEELVDAFVGGARISSAFPYSGDTYYLPKPLSVEPALEGILTGLDEEERYTTAKRLRKAKYLDLKNFELALRLRPFTIPEEIPYARVDVPRVVLDRVTQDSSIYFWEEIRFREKSGVYFLYSGPREVFDGYIAPAMRFLGDTGIGGKSTWGAGLFEVEFHEMKIDAPGSEYSVTLSNALPTKTPVLWRLLRKGGWSFGRRKPRMTFIAEGSIVKNDPGGMERLELGLSHEVYVYGLTFPLGVELPEGLE
Csm5 F 397 Thermococcus Onnurineus (Strain Na1) MTERTLKVLSPLHIGTGNELTPVDIYPRENIIHVLDTERLVNDLMNLGVELNEILALLKNPPGDAYIWKGYIEEFHLDPSDYSIYTLKIHGKIGRKSMQIKEFIKLNGRPYIPGSSLKGAIRTAVLYKALKECGDARAVMRVVSKVNGDVARDIGRSEDVLDYYMSFLSRARIDRKRADDLLEAIVFGMEPDRRSKIRYEPKRDPMKALIVRDSKPVGRKHLAVYHVEVIGNPQPIPIWVEAIEPGAATDVEIHVDTEALRLNADYFNGLLWECLKERGEPGEVFEDFLWEAVDEFYTAVMKYETIEVQKFGRYTSQVRSFYASLEDHSGHVLRLGWGSGWLAMTIGLLLVEKGYKWENVRKKLGLGKKPGGSGFSREFPKTRRLADGMPMGWVVLE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*GP*UP*GP*GP*AP*AP*AP*GP*UP*GP*GP*CP*CP*CP*GP*AP*AP*AP*CP*CP*CP*UP*UP*C)-3') i 24 NA GUGGAAAGUGGCCCGAAACCCUUC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-11-09
Deposition Author(s): Dong, Q. , Huo, Y. , Jiang, T. , Li, T. , Wang, N. , Wang, X.