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FASTA Sequence PDB Format mmCIF Format
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6IMM

Cryo-em structure of an alphavirus, sindbis virus

PDB DOI: 10.2210/pdb6imm/pdb

Classification: VIRUS
Organism(s): Sindbis Virus

Deposited: 2018-10-23
Deposition Author(s): Chen, L. , Ma, J. , Zhang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

6imm
Literature

Cryo-em structure of an alphavirus, sindbis virus

Chen, L. , Ma, J. , Zhang, X.

Primary Citation of Related Structures: 6IMM


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein E1 N 439 Sindbis Virus FEHATTVPNVPRIPYKALVERAGYAPLNLEITVMSSELIPSTNLEYVTCKYTTVVPSPKVKCCGTLECSSARHADYNCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVEFSADCAADHAQAVKVHTAALKAGLRIVYGNTTSMLDVYVNGVTPGTSKDLKVIAGPISAAYTPFDHKVIIHKGKVYNYDFPEYGAMKPGAFGDIQATSLTSNDLIANTDIRLLKPSAKNVHVPYTQAASGFEMWKNNSGRPLQETAPFGCQIAVNPLRAVDCAYGNIPISLDIPNAAFVRVSDAPLVTALKCEVGECVYSADFGGIATLQYSSDREGQCSVHSHSSTATLQESTVHVLQKGGATIHFSTASPQANFIVSLCGKKTTCNAECKPPADHIVNVPHKNDQEFQAAVSQTSWSWLFALFGGASSLLVIGVMIFACSALLTSTRR
Spike glycoprotein E1 T 439 Sindbis Virus FEHATTVPNVPRIPYKALVERAGYAPLNLEITVMSSELIPSTNLEYVTCKYTTVVPSPKVKCCGTLECSSARHADYNCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVEFSADCAADHAQAVKVHTAALKAGLRIVYGNTTSMLDVYVNGVTPGTSKDLKVIAGPISAAYTPFDHKVIIHKGKVYNYDFPEYGAMKPGAFGDIQATSLTSNDLIANTDIRLLKPSAKNVHVPYTQAASGFEMWKNNSGRPLQETAPFGCQIAVNPLRAVDCAYGNIPISLDIPNAAFVRVSDAPLVTALKCEVGECVYSADFGGIATLQYSSDREGQCSVHSHSSTATLQESTVHVLQKGGATIHFSTASPQANFIVSLCGKKTTCNAECKPPADHIVNVPHKNDQEFQAAVSQTSWSWLFALFGGASSLLVIGVMIFACSALLTSTRR
Spike glycoprotein E1 Z 439 Sindbis Virus FEHATTVPNVPRIPYKALVERAGYAPLNLEITVMSSELIPSTNLEYVTCKYTTVVPSPKVKCCGTLECSSARHADYNCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVEFSADCAADHAQAVKVHTAALKAGLRIVYGNTTSMLDVYVNGVTPGTSKDLKVIAGPISAAYTPFDHKVIIHKGKVYNYDFPEYGAMKPGAFGDIQATSLTSNDLIANTDIRLLKPSAKNVHVPYTQAASGFEMWKNNSGRPLQETAPFGCQIAVNPLRAVDCAYGNIPISLDIPNAAFVRVSDAPLVTALKCEVGECVYSADFGGIATLQYSSDREGQCSVHSHSSTATLQESTVHVLQKGGATIHFSTASPQANFIVSLCGKKTTCNAECKPPADHIVNVPHKNDQEFQAAVSQTSWSWLFALFGGASSLLVIGVMIFACSALLTSTRR
Spike glycoprotein E1 A 439 Sindbis Virus FEHATTVPNVPRIPYKALVERAGYAPLNLEITVMSSELIPSTNLEYVTCKYTTVVPSPKVKCCGTLECSSARHADYNCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVEFSADCAADHAQAVKVHTAALKAGLRIVYGNTTSMLDVYVNGVTPGTSKDLKVIAGPISAAYTPFDHKVIIHKGKVYNYDFPEYGAMKPGAFGDIQATSLTSNDLIANTDIRLLKPSAKNVHVPYTQAASGFEMWKNNSGRPLQETAPFGCQIAVNPLRAVDCAYGNIPISLDIPNAAFVRVSDAPLVTALKCEVGECVYSADFGGIATLQYSSDREGQCSVHSHSSTATLQESTVHVLQKGGATIHFSTASPQANFIVSLCGKKTTCNAECKPPADHIVNVPHKNDQEFQAAVSQTSWSWLFALFGGASSLLVIGVMIFACSALLTSTRR
Spike glycoprotein E2 P 388 Sindbis Virus FTLTSPYLGTCSYCHHTEPCFSPVKIEQVWDEADDNTIRIQTSAQFGYDQSGAASVNKYRIMSLKQDHTIEEGSMDAIKISTSGPCRRLNHKGYFLLAKCPPGDSVTVSISAGDSATSCTLARKVKPKFVGREKYDLPPVHGKKIPCYIYDRLKETSAGYITMHRPGPHAYATYLEESSGKVYAKPPSGKNITYKSDQTKWVFNSPDLIRHADHTAQGKMHLPFKLVPSTCLVPLAHVPQVVHGFKHISLQLDTDHLTLLTTRRLGEKPEPTSEWIIGKTVRNFSVGRDGFEYIWGNHEPVRVWAQESAPGDPHGWPHEIVQHYYHRHPVYTVMILVAATLAIVLGVSVASVCVCRARRECLTPYALAPNAVVPTSIALLCCIRPTSA
Spike glycoprotein E2 V 388 Sindbis Virus FTLTSPYLGTCSYCHHTEPCFSPVKIEQVWDEADDNTIRIQTSAQFGYDQSGAASVNKYRIMSLKQDHTIEEGSMDAIKISTSGPCRRLNHKGYFLLAKCPPGDSVTVSISAGDSATSCTLARKVKPKFVGREKYDLPPVHGKKIPCYIYDRLKETSAGYITMHRPGPHAYATYLEESSGKVYAKPPSGKNITYKSDQTKWVFNSPDLIRHADHTAQGKMHLPFKLVPSTCLVPLAHVPQVVHGFKHISLQLDTDHLTLLTTRRLGEKPEPTSEWIIGKTVRNFSVGRDGFEYIWGNHEPVRVWAQESAPGDPHGWPHEIVQHYYHRHPVYTVMILVAATLAIVLGVSVASVCVCRARRECLTPYALAPNAVVPTSIALLCCIRPTSA
Spike glycoprotein E2 D 388 Sindbis Virus FTLTSPYLGTCSYCHHTEPCFSPVKIEQVWDEADDNTIRIQTSAQFGYDQSGAASVNKYRIMSLKQDHTIEEGSMDAIKISTSGPCRRLNHKGYFLLAKCPPGDSVTVSISAGDSATSCTLARKVKPKFVGREKYDLPPVHGKKIPCYIYDRLKETSAGYITMHRPGPHAYATYLEESSGKVYAKPPSGKNITYKSDQTKWVFNSPDLIRHADHTAQGKMHLPFKLVPSTCLVPLAHVPQVVHGFKHISLQLDTDHLTLLTTRRLGEKPEPTSEWIIGKTVRNFSVGRDGFEYIWGNHEPVRVWAQESAPGDPHGWPHEIVQHYYHRHPVYTVMILVAATLAIVLGVSVASVCVCRARRECLTPYALAPNAVVPTSIALLCCIRPTSA
Spike glycoprotein E2 E 388 Sindbis Virus FTLTSPYLGTCSYCHHTEPCFSPVKIEQVWDEADDNTIRIQTSAQFGYDQSGAASVNKYRIMSLKQDHTIEEGSMDAIKISTSGPCRRLNHKGYFLLAKCPPGDSVTVSISAGDSATSCTLARKVKPKFVGREKYDLPPVHGKKIPCYIYDRLKETSAGYITMHRPGPHAYATYLEESSGKVYAKPPSGKNITYKSDQTKWVFNSPDLIRHADHTAQGKMHLPFKLVPSTCLVPLAHVPQVVHGFKHISLQLDTDHLTLLTTRRLGEKPEPTSEWIIGKTVRNFSVGRDGFEYIWGNHEPVRVWAQESAPGDPHGWPHEIVQHYYHRHPVYTVMILVAATLAIVLGVSVASVCVCRARRECLTPYALAPNAVVPTSIALLCCIRPTSA
Assembly protein E3 R 69 Sindbis Virus SAAPLVAAMCILGNMTFPCNQPPTCYSREPARALDILEANVDSAAYDDLMRAVLRCTPSSRAKRNITDD
Assembly protein E3 X 69 Sindbis Virus SAAPLVAAMCILGNMTFPCNQPPTCYSREPARALDILEANVDSAAYDDLMRAVLRCTPSSRAKRNITDD
Assembly protein E3 H 69 Sindbis Virus SAAPLVAAMCILGNMTFPCNQPPTCYSREPARALDILEANVDSAAYDDLMRAVLRCTPSSRAKRNITDD
Assembly protein E3 I 69 Sindbis Virus SAAPLVAAMCILGNMTFPCNQPPTCYSREPARALDILEANVDSAAYDDLMRAVLRCTPSSRAKRNITDD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-10-23
Deposition Author(s): Chen, L. , Ma, J. , Zhang, X.