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6IMJ

The crystal structure of se-asfvlig:dna complex

PDB DOI: 10.2210/pdb6imj/pdb

Classification: LIGASE/DNA
Organism(s): African Swine Fever Virus , Synthetic Construct

Deposited: 2018-10-23
Deposition Author(s): Chen, Y.Q. , Gan, J.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.554 Å

Literature

The crystal structure of se-asfvlig:dna complex

Chen, Y.Q. , Gan, J.H.

Primary Citation of Related Structures: 6IMJ


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase A 419 African Swine Fever Virus , Synthetic Construct MLNQFPGQYSNNIFCFPPIESETKSGKKASWIICVQVVQHNTIIPITDEMFSTDVKDAVAEIFTKFFVEEGAVRISKMTRVTEGKNLGKKNATTVVHQAFKDALSKYNRHARQKRGAHTNRGMIPPMLVKYFNIIPKTFFEEETDPIVQRKRNGVRAVACQQGDGCILLYSRTEKEFLGLDNIKKELKQLYLFIDVRVYLDGELYLHRKPLQWIAGQANAKTDSSELHFYVFDCFWSDQLQMPSNKRQQLLTNIFKQKEDLTFIHQVENFSVKNVDEALRLKAQFIKEGYEGAIVRNANGPYEPGYNNYHSAHLAKLKPLLDAEFILVDYTQGKKGKDLGAILWVCELPNKKRFVVTPKHLTYADRYALFQKLTPALFKKHLYGKELTVEYAELSPKTGIPLQARAVGFREPINVLEII
DNA ligase B 419 African Swine Fever Virus , Synthetic Construct MLNQFPGQYSNNIFCFPPIESETKSGKKASWIICVQVVQHNTIIPITDEMFSTDVKDAVAEIFTKFFVEEGAVRISKMTRVTEGKNLGKKNATTVVHQAFKDALSKYNRHARQKRGAHTNRGMIPPMLVKYFNIIPKTFFEEETDPIVQRKRNGVRAVACQQGDGCILLYSRTEKEFLGLDNIKKELKQLYLFIDVRVYLDGELYLHRKPLQWIAGQANAKTDSSELHFYVFDCFWSDQLQMPSNKRQQLLTNIFKQKEDLTFIHQVENFSVKNVDEALRLKAQFIKEGYEGAIVRNANGPYEPGYNNYHSAHLAKLKPLLDAEFILVDYTQGKKGKDLGAILWVCELPNKKRFVVTPKHLTYADRYALFQKLTPALFKKHLYGKELTVEYAELSPKTGIPLQARAVGFREPINVLEII

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*C*CP*GP*GP*GP*AP*TP*GP*CP*TP*GP*GP*TP*CP*GP*GP*AP*CP*TP*GP*G)-3') c 22 NA TCCGGGATGCTGGTCGGACTGG
DNA (5'-D(*C*CP*AP*GP*TP*CP*CP*GP*AP*CP*CP*CP*GP*CP*AP*TP*CP*CP*CP*GP*GP*A)-3') d 22 NA CCAGTCCGACCCGCATCCCGGA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-10-23
Deposition Author(s): Chen, Y.Q. , Gan, J.H.