PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6ILM

Cryo-em structure of echovirus 6 complexed with its uncoating receptor fcrn at ph 7.4

PDB DOI: 10.2210/pdb6ilm/pdb

Classification: VIRUS
Organism(s): Human Hepatitis A Virus , Salmonella Enterica

Deposited: 2018-10-19
Deposition Author(s): Gao, G.F. , Liu, S. , Peng, R. , Zhao, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

6ilm
Literature

Cryo-em structure of echovirus 6 complexed with its uncoating receptor fcrn at ph 7.4

Gao, G.F. , Liu, S. , Peng, R. , Zhao, X.

Primary Citation of Related Structures: 6ILM


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 A 289 Human Hepatitis A Virus , Salmonella Enterica NDVQNAIDRAVVRVADTMPSGPSNSESIPALTAAETGHTSQVVPSDTIQTRHVRNFHVRSESSVENFLSRSACVYIVEYKTRDDTPDKMYDSWVINTRQVAQLRRKLEFFTYVRFDVEVTFVITSVQDDSTRQNTDTPALTHQIMYVPPGGPIPQAVDDYNWQTSTNPSVFWTEGNAPPRMSIPFMSVGNAYSNFYDGWSHFSQTGVYGFNTLNNMGKLYFRHVNDKTISPITSKVRIYFKPKHVKAWVPRPPRLCEYTHKDNVDFEPKGVTTSRTQLTISNSTHVENY
Capsid protein VP2 B 252 Human Hepatitis A Virus , Salmonella Enterica SDRVRSITLGNSTITTQESANVVVGYGVWPDYLSDEEATAEDQPTQPDVATCRFYTLDSVSWMKESQGWWWKFPDALRDMGLFGQNMQYHYLGRSGYTIHVQCNASKFHQGCLLVVCVPEAEMGAANINEKINREHLSNGEVANTFSGTKSSNTNDVQQAVFNAGMGVAVGNLTIFPHQWINLRTNNCATIVMPYINSVPMDNMFRHYNFTLMIIPFAKLDYAAGSSTYIPITVTVAPMCAEYNGLRLAGHQ
Capsid protein VP3 C 238 Human Hepatitis A Virus , Salmonella Enterica GLPVMNTPGSNQFLTSDDYQSPTAMPQFDVTPEMNIPGEVKNLMEIAEVDSVVPVNNVNENVNSLEAYRIPVHSVTETGAQVFGFTLQPGADTVMERTLLGEILNYYANWSGSIKLTFMYCGSAMATGKFLLAYSPPGAGVPKNRREAMLGTHIIWDIGLQSSCVLCVPWISQTHYRFVSKDIYTDAGFITCWYQTSIVVPAEVQNQSVILCFVSACNDFSVRLLRDSPFVRQTAFYQ
Capsid protein VP4 D 68 Human Hepatitis A Virus , Salmonella Enterica GAQVSTQKTGAHETSLSASGNSIIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKSLPALN
IgG receptor FcRn large subunit p51 E 263 Human Hepatitis A Virus , Salmonella Enterica LSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVWENQVSWYWEKETTDLRIKEKLFLEAFKALGGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMNFDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLFSCPHRLREHLERGRGNLEWKEPPSMRLKARPSSPGFSVLTCSAFSFYPPELQLRFLRNGLAAGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYCCIVQHAGLAQPLRVEL
Beta-2-microglobulin F 99 Human Hepatitis A Virus , Salmonella Enterica IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-10-19
Deposition Author(s): Gao, G.F. , Liu, S. , Peng, R. , Zhao, X.