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6ILK

Cryo-em structure of echovirus 6 complexed with its attachment receptor cd55 at ph 7.4

PDB DOI: 10.2210/pdb6ilk/pdb

Classification: VIRUS
Organism(s): Echovirus E6 , Homo Sapiens

Deposited: 2018-10-18
Deposition Author(s): Gao, G.F. , Liu, S. , Peng, R. , Zhao, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

6ilk
Literature

Cryo-em structure of echovirus 6 complexed with its attachment receptor cd55 at ph 7.4

Gao, G.F. , Liu, S. , Peng, R. , Zhao, X.

Primary Citation of Related Structures: 6ILK


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 A 278 Echovirus E6 , Homo Sapiens VVRVADTMPSGPSNSESIPALTAAETGHTSQVVPSDTIQTRHVRNFHVRSESSVENFLSRSACVYIVEYKTRDDTPDKMYDSWVINTRQVAQLRRKLEFFTYVRFDVEVTFVITSVQDDSTRQNTDTPALTHQIMYVPPGGPIPQAVDDYNWQTSTNPSVFWTEGNAPPRMSIPFMSVGNAYSNFYDGWSHFSQTGVYGFNTLNNMGKLYFRHVNDKTISPITSKVRIYFKPKHVKAWVPRPPRLCEYTHKDNVDFEPKGVTTSRTQLTISNSTHVEN
Capsid protein VP2 B 252 Echovirus E6 , Homo Sapiens SDRVRSITLGNSTITTQESANVVVGYGVWPDYLSDEEATAEDQPTQPDVATCRFYTLDSVSWMKESQGWWWKFPDALRDMGLFGQNMQYHYLGRSGYTIHVQCNASKFHQGCLLVVCVPEAEMGAANINEKINREHLSNGEVANTFSGTKSSNTNDVQQAVFNAGMGVAVGNLTIFPHQWINLRTNNCATIVMPYINSVPMDNMFRHYNFTLMIIPFAKLDYAAGSSTYIPITVTVAPMCAEYNGLRLAGHQ
Capsid protein VP3 C 238 Echovirus E6 , Homo Sapiens GLPVMNTPGSNQFLTSDDYQSPTAMPQFDVTPEMNIPGEVKNLMEIAEVDSVVPVNNVNENVNSLEAYRIPVHSVTETGAQVFGFTLQPGADTVMERTLLGEILNYYANWSGSIKLTFMYCGSAMATGKFLLAYSPPGAGVPKNRREAMLGTHIIWDIGLQSSCVLCVPWISQTHYRFVSKDIYTDAGFITCWYQTSIVVPAEVQNQSVILCFVSACNDFSVRLLRDSPFVRQTAFYQ
Capsid protein VP4 D 68 Echovirus E6 , Homo Sapiens GAQVSTQKTGAHETSLSASGNSIIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKSLPALN
Complement decay-accelerating factor E 192 Echovirus E6 , Homo Sapiens CNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-10-18
Deposition Author(s): Gao, G.F. , Liu, S. , Peng, R. , Zhao, X.