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FASTA Sequence PDB Format mmCIF Format
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6IID

Human exog-h140a in complex with rna-dna chimeric duplex

PDB DOI: 10.2210/pdb6iid/pdb

Classification: HYDROLASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2018-10-04
Deposition Author(s): Lin, J.L.J. , Wu, C.C. , Yuan, H.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.986 Å

6iid
Literature

Human exog-h140a in complex with rna-dna chimeric duplex

Lin, J.L.J. , Wu, C.C. , Yuan, H.S.

Primary Citation of Related Structures: 6IID


Proteins
Molecule Chains Sequence Length Organism Sequence
Nuclease EXOG, mitochondrial A 348 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMQGAEGALTGKQPDGSAEKAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGAMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS
Nuclease EXOG, mitochondrial B 348 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMQGAEGALTGKQPDGSAEKAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGAMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS
Nuclease EXOG, mitochondrial C 348 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMQGAEGALTGKQPDGSAEKAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGAMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS
Nuclease EXOG, mitochondrial D 348 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMQGAEGALTGKQPDGSAEKAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGAMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA/RNA (5'-R(P*CP*GP*GP*GP*A)-D(P*T)-R(P*G)-D(P*T)-R(P*CP*AP*CP*G)-3') e 12 NA CGGGATGTCACG
DNA/RNA (5'-R(P*CP*GP*GP*GP*A)-D(P*T)-R(P*G)-D(P*T)-R(P*CP*AP*CP*G)-3') g 12 NA CGGGATGTCACG
DNA/RNA (5'-R(P*CP*GP*GP*GP*A)-D(P*T)-R(P*G)-D(P*T)-R(P*CP*AP*CP*G)-3') i 12 NA CGGGATGTCACG
DNA/RNA (5'-R(P*CP*GP*GP*GP*A)-D(P*T)-R(P*G)-D(P*T)-R(P*CP*AP*CP*G)-3') k 12 NA CGGGATGTCACG
DNA (5'-D(*CP*GP*TP*GP*AP*CP*AP*TP*CP*CP*CP*G)-3') f 12 NA CGTGACATCCCG
DNA (5'-D(*CP*GP*TP*GP*AP*CP*AP*TP*CP*CP*CP*G)-3') h 12 NA CGTGACATCCCG
DNA (5'-D(*CP*GP*TP*GP*AP*CP*AP*TP*CP*CP*CP*G)-3') j 12 NA CGTGACATCCCG
DNA (5'-D(*CP*GP*TP*GP*AP*CP*AP*TP*CP*CP*CP*G)-3') l 12 NA CGTGACATCCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-10-04
Deposition Author(s): Lin, J.L.J. , Wu, C.C. , Yuan, H.S.