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6IDE

Crystal structure of the vibrio cholera vqma-ligand-dna complex provides molecular mechanisms for drug design

PDB DOI: 10.2210/pdb6ide/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Puumala Virus (Strain P360) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2018-09-09
Deposition Author(s): Guo, H.J. , He, J.H. , Li, B. , Li, M.J. , Wu, H. , Xu, C.Y. , Xu, Q. , Yu, F. , Zhou, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.51 Å

6ide
Literature

Crystal structure of the vibrio cholera vqma-ligand-dna complex provides molecular mechanisms for drug design

Guo, H.J. , He, J.H. , Li, B. , Li, M.J. , Wu, H. , Xu, C.Y. , Xu, Q. , Yu, F. , Zhou, H.

Primary Citation of Related Structures: 6IDE


Proteins
Molecule Chains Sequence Length Organism Sequence
Transcriptional regulator LuxR family A 256 Puumala Virus (Strain P360) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKPNHLTLEQISLFKQLPGYWGCKDLNSVFVYANQAYGELIGLKRAEDCIGRTDFEMPSPTAACAAEFQQQDRYVIETGHSVKVLDIHPYPDGHWHAHIFTKTPWRDSQGKIQGTIFFGQDLTDTAILEVGHWVCRATGLSTSTTFKSVADRDTLKLTARESEVLFLLLYGKKPQHIARVMGISIKTVEGYEAKLRSKFGALSKDQLIDLALDRGFGSVIPKTLLRKQLSVVLSDHTIPKKVDVVAQLLEHHHHHH
Transcriptional regulator LuxR family B 256 Puumala Virus (Strain P360) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKPNHLTLEQISLFKQLPGYWGCKDLNSVFVYANQAYGELIGLKRAEDCIGRTDFEMPSPTAACAAEFQQQDRYVIETGHSVKVLDIHPYPDGHWHAHIFTKTPWRDSQGKIQGTIFFGQDLTDTAILEVGHWVCRATGLSTSTTFKSVADRDTLKLTARESEVLFLLLYGKKPQHIARVMGISIKTVEGYEAKLRSKFGALSKDQLIDLALDRGFGSVIPKTLLRKQLSVVLSDHTIPKKVDVVAQLLEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*GP*GP*GP*GP*GP*GP*AP*AP*AP*TP*CP*CP*CP*CP*CP*CP*T)-3') c 18 NA AGGGGGGAAATCCCCCCT
DNA (5'-D(*AP*GP*GP*GP*GP*GP*GP*AP*TP*TP*TP*CP*CP*CP*CP*CP*CP*T)-3') d 18 NA AGGGGGGATTTCCCCCCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-09-09
Deposition Author(s): Guo, H.J. , He, J.H. , Li, B. , Li, M.J. , Wu, H. , Xu, C.Y. , Xu, Q. , Yu, F. , Zhou, H.