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6H9C

Cryo-em structure of archaeal extremophilic internal membrane-containing haloarcula californiae icosahedral virus 1 (hciv-1) at 3.74 angstroms resolution.

PDB DOI: 10.2210/pdb6h9c/pdb

Classification: VIRUS
Organism(s): Haloarcula Californiae Atcc 33799

Deposited: 2018-08-03
Deposition Author(s): Abrescia, N.G. , Charro, D. , Santos-Perez, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.74 Å

6h9c
Literature

Cryo-em structure of archaeal extremophilic internal membrane-containing haloarcula californiae icosahedral virus 1 (hciv-1) at 3.74 angstroms resolution.

Abrescia, N.G. , Charro, D. , Santos-Perez, I.

Primary Citation of Related Structures: 6H9C


Proteins
Molecule Chains Sequence Length Organism Sequence
GPS-II protein located underneath the two-tower capsomer NOT sitting on the icosahedral 2-fold axis. D 75 Haloarcula Californiae Atcc 33799 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Peripentonal unknown polypeptide F 18 Haloarcula Californiae Atcc 33799 XXXXXXXXXXXXXXXXXX
(Half) GPS-II protein located underneath the two-tower capsomer sitting ON the icosahedral 2-fold axis. E 46 Haloarcula Californiae Atcc 33799 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
VP7 R 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 T 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 S 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 W 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 K 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 J 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 M 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 N 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 I 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP7 L 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP4 A 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP7 Y 184 Haloarcula Californiae Atcc 33799 MGNIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDGYVIAVDAGTPIAPEFRDSNGEKLDPSTRVIVQKCDRQGNPLGDGIIFNDTLGRFNYNKMRTDPDYMRKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRFTLGDDTSDFGKAVEIVDHDDLTEGETQAVKSASQRSGGA
VP4 B 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 C 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 Z 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 P 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 Q 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 O 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 V 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 U 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 H 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 G 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
VP4 X 232 Haloarcula Californiae Atcc 33799 MADQTQEYTLSHTGGLLGSSKVTTASNQTAPQRETAIISFEVPRKFSEIEYVGQRDATRFVPRTTEEITGTANDDTVVQLQANIQPIAGEEDMADQDYPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTVKLWPIMGDGEVQFRLVNQFGQEEGRVYPWATPLYRWHDFPQLKRGREINLHGSVTWQENETVEVLLDAPQAITWEDADYPEGQYVSTFEQDVEITL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-08-03
Deposition Author(s): Abrescia, N.G. , Charro, D. , Santos-Perez, I.