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6H82

Cryo-em structure of the archaeal extremophilic internal membrane containing haloarcula hispanica icosahedral virus 2 (hhiv-2) at 3.78 angstroms resolution.

PDB DOI: 10.2210/pdb6h82/pdb

Classification: VIRUS
Organism(s): Haloarcula Hispanica Icosahedral Virus 2

Deposited: 2018-08-01
Deposition Author(s): Abrescia, N.G. , Charro, D. , Santos-Perez, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.78 Å

6h82
Literature

Cryo-em structure of the archaeal extremophilic internal membrane containing haloarcula hispanica icosahedral virus 2 (hhiv-2) at 3.78 angstroms resolution.

Abrescia, N.G. , Charro, D. , Santos-Perez, I.

Primary Citation of Related Structures: 6H82


Proteins
Molecule Chains Sequence Length Organism Sequence
VP7 A 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
GPS III C 105 Haloarcula Hispanica Icosahedral Virus 2 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Uncharacterized protein B 135 Haloarcula Hispanica Icosahedral Virus 2 QTADGRVGLVPVNSYVTLETDDLDTDEHPVTDAGTVALEPGESAPIVRYDLGQPAAVYAVGATDEANVEYELKVNNSKTVGGRTNSPLGVLNTPFSFVEKLGGAIPCETAATYWAHYSSDATGTVELAGRMHIEV
VP4 Q 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP4 P 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP4 O 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP4 U 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP4 Z 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP4 V 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP4 H 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
VP16 (vertex complex) G 217 Haloarcula Hispanica Icosahedral Virus 2 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
VP4 X 229 Haloarcula Hispanica Icosahedral Virus 2 QTQEYTINHTGGVLGDSYVTTASNQTSPQRETAVLSFECPRKFEEINYVGQRDATRFVPRTTESITGSANDDTVVDLTANIQPVAGEEVIAEQDYPVAVAYNVTQGVEVDVVDADYAADTVTLGTNPADGDEVKVWPIMSDGDVQFRLINQFGQEEGRVYPWSTPLYRWHDFPQLKRGREINLHGSASWSENETLEILLDAPQALTWEDSDYPRGQYVTTLEQDVEITL
GPS III D 105 Haloarcula Hispanica Icosahedral Virus 2 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
VP7 T 172 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKA
VP7 J 172 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKA
VP7 W 172 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKA
VP7 E 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
VP7 F 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
VP7 R 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
VP7 S 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
VP7 K 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
polypeptide stretch (vertex complex) M 25 Haloarcula Hispanica Icosahedral Virus 2 XXXXXXXXXXXXXXXXXXXXXXXXX
VP7 N 175 Haloarcula Hispanica Icosahedral Virus 2 PEIGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHGDLSPAESKAVRQ
VP7 L 161 Haloarcula Hispanica Icosahedral Virus 2 IGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHG
VP7 I 161 Haloarcula Hispanica Icosahedral Virus 2 IGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHG
VP7 Y 161 Haloarcula Hispanica Icosahedral Virus 2 IGNNGAEKQISLHKGQPFIDTQDVGAADPNTPAVTIEGPSDYVIAIDAGTPVAPEFRDANGDKLDPSTRVTIQKCDKQGNPLGDGIVFSDTLGRFEYSKMRSDPDYMRKTTTSLMIDEREIVKIFVEVPPNANGMDADNSRITIGDDTSDYGKAVGIVEHG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-08-01
Deposition Author(s): Abrescia, N.G. , Charro, D. , Santos-Perez, I.