Gi.1 human norovirus protruding domain in complex with nano-62
PDB DOI: 10.2210/pdb6h6z/pdb
Classification: VIRAL PROTEIN Organism(s): Norwalk Virus (Strain Gi/Human/United States/Norwalk/1968) , Vicugna Pacos
Deposited: 2018-07-30 Deposition Author(s): Hansman, G.S. , Kilic, T.
Gi.1 human norovirus protruding domain in complex with nano-62
Primary Citation of Related Structures: 6H6Z
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Capsid protein VP1 | A | 292 | Norwalk Virus (Strain Gi/Human/United States/Norwalk/1968) , Vicugna Pacos | KTRPFTLPNLPLSSLSNSRAPLPISSIGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVSRFYQLKPVGT |
Capsid protein VP1 | B | 292 | Norwalk Virus (Strain Gi/Human/United States/Norwalk/1968) , Vicugna Pacos | KTRPFTLPNLPLSSLSNSRAPLPISSIGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVSRFYQLKPVGT |
Nanobody (VHH) Nano-62 | C | 141 | Norwalk Virus (Strain Gi/Human/United States/Norwalk/1968) , Vicugna Pacos | QVQLQESGGGLVMTGGSLRLSCAVSGRTIDVSVMAWFRQAPGKEREFVSGMRWSGMTTYSADSVKDRFTISRDKTKNTVYLQMNSLKPEDTAVYYCAARSRFIVGVPQARDLYDYWGQGTQVTVSSGRYPYDVPDYGSGRA |
Nanobody (VHH) Nano-62 | D | 141 | Norwalk Virus (Strain Gi/Human/United States/Norwalk/1968) , Vicugna Pacos | QVQLQESGGGLVMTGGSLRLSCAVSGRTIDVSVMAWFRQAPGKEREFVSGMRWSGMTTYSADSVKDRFTISRDKTKNTVYLQMNSLKPEDTAVYYCAARSRFIVGVPQARDLYDYWGQGTQVTVSSGRYPYDVPDYGSGRA |
Method: X-RAY DIFFRACTION
Deposited Date: 2018-07-30 Deposition Author(s): Hansman, G.S. , Kilic, T.