6GZV
Identification of a druggable vp1-vp3 interprotomer pocket in the capsid of enteroviruses
PDB DOI: 10.2210/pdb6gzv/pdb
Classification: VIRUS Organism(s): Coxsackievirus B3 (Strain Nancy)
Deposited: 2018-07-05 Deposition Author(s): Butcher, S.J. , Domanska, A. , Flatt, J.W. , Geraets, J.A.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.0 Å
Identification of a druggable vp1-vp3 interprotomer pocket in the capsid of enteroviruses
Butcher, S.J. , Domanska, A. , Flatt, J.W. , Geraets, J.A.
Primary Citation of Related Structures: 6GZV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein VP1 | A | 284 | Coxsackievirus B3 (Strain Nancy) | GPVEDAITAAIGRVADTVGTGPTNSEAIPALTAAETGHTSQVVPGDTMQTRHVKNYHSRSESTIENFLCRSACVYFTEYKNSGAKRYAEWVLTPRQAAQLRRKLEFFTYVRFDLELTFVITSTQQPSTTQNQDAQILTHQIMYVPPGGPVPDKVDSYVWQTSTNPSVFWTEGNAPPRMSIPFLSIGNAYSNFYDGWSEFSRNGVYGINTLNNMGTLYARHVNAGSTGPIKSTIRIYFKPKHVKAWIPRPPRLCQYEKAKNVNFQPSGVTTTRQSITTMTNTGAF |
| Capsid protein VP2 | B | 263 | Coxsackievirus B3 (Strain Nancy) | SPTVEECGYSDRARSITLGNSTITTQECANVVVGYGVWPDYLKDSEATAEDQPTQPDVATCRFYTLDSVQWQKTSPGWWWKLPDALSNLGLFGQNMQYHYLGRTGYTVHVQCNASKFHQGCLLVVCVPEAEMGCATLDNTPSSAELLGGDTAKEFADKPVASGSNKLVQRVVYNAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYTNSVPMDNMFRHNNVTLMVIPFVPLDYCPGSTTYVPITVTIAPMCAEYNGLRLAGHQ |
| Capsid protein VP3 | C | 238 | Coxsackievirus B3 (Strain Nancy) | GLPTMNTPGSCQFLTSDDFQSPSAMPQYDVTPEMRIPGEVKNLMEIAEVDSVVPVQNVGEKVNSMEAYQIPVRSNEGSGTQVFGFPLQPGYSSVFSRTLLGEILNYYTHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTKRVDAMLGTHVIWDVGLQSSCVLCIPWISQTHYRFVASDEYTAGGFITCWYQTNIVVPADAQSSCYIMCFVSACNDFSVRLLKDTPFISQQNFFQ |
| Capsid protein VP4 | D | 69 | Coxsackievirus B3 (Strain Nancy) | MGAQVSTQKTGAHETRLNASGNSIIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMIKSLPALN |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-07-05 Deposition Author(s): Butcher, S.J. , Domanska, A. , Flatt, J.W. , Geraets, J.A.