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6GCD

Dna binding domain of restriction endonuclease mcrbc in complex with 5-hydroxymethylcytosine dna

PDB DOI: 10.2210/pdb6gcd/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2018-04-17
Deposition Author(s): Manakova, E. , Sasnauskas, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.8 Å

Literature

Dna binding domain of restriction endonuclease mcrbc in complex with 5-hydroxymethylcytosine dna

Manakova, E. , Sasnauskas, G.

Primary Citation of Related Structures: 6GCD


Proteins
Molecule Chains Sequence Length Organism Sequence
5-methylcytosine-specific restriction enzyme B A 170 Escherichia Coli , Synthetic Construct MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPLEGHHHHHH
5-methylcytosine-specific restriction enzyme B B 170 Escherichia Coli , Synthetic Construct MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPLEGHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*GP*AP*(5HC)P*CP*GP*GP*TP*AP*GP*C)-3') c 12 NA GAGAXCGGTAGC
DNA (5'-D(*GP*CP*TP*AP*(5HC)P*CP*GP*GP*TP*CP*TP*C)-3') d 12 NA GCTAXCGGTCTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-04-17
Deposition Author(s): Manakova, E. , Sasnauskas, G.