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6FY0

Crystal structure of a v2-directed, rv144 vaccine-like antibody from hiv-1 infection, cap228-16h, bound to a heterologous v2 peptide

PDB DOI: 10.2210/pdb6fy0/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2018-03-10
Deposition Author(s): Dirr, H.W. , Fernandes, M. , Moore, P.L. , Morris, L. , Sayed, Y. , Vijayakumar, B. , Wibmer, C.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.57 Å

6fy0
Literature

Crystal structure of a v2-directed, rv144 vaccine-like antibody from hiv-1 infection, cap228-16h, bound to a heterologous v2 peptide

Dirr, H.W. , Fernandes, M. , Moore, P.L. , Morris, L. , Sayed, Y. , Vijayakumar, B. , Wibmer, C.K.

Primary Citation of Related Structures: 6FY0


Proteins
Molecule Chains Sequence Length Organism Sequence
CAP228-16H Heavy Chain H 235 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVQSGAEVKKPGESLKISCKGSGYRFPSSWIGWVRQVPGKGLEWMGIIYPGDGETRYRASFQGQVTISADQSSNTAYLQWSSLKASDTAMYYCARHGRGVREVINAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
CAP228-16H Heavy Chain I 235 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVQSGAEVKKPGESLKISCKGSGYRFPSSWIGWVRQVPGKGLEWMGIIYPGDGETRYRASFQGQVTISADQSSNTAYLQWSSLKASDTAMYYCARHGRGVREVINAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
CAP228-16H Light Chain L 213 Homo Sapiens , Human Immunodeficiency Virus 1 SYELTQPPSVSVAPGTTATITCGGVDIGSTLVHWYQQRPGQAPLLVIYDDSDRPSGIPERFSGSNSGNMATLTISRVEAGDEADYYCQVWHSTSAVIFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CAP228-16H Light Chain M 213 Homo Sapiens , Human Immunodeficiency Virus 1 SYELTQPPSVSVAPGTTATITCGGVDIGSTLVHWYQQRPGQAPLLVIYDDSDRPSGIPERFSGSNSGNMATLTISRVEAGDEADYYCQVWHSTSAVIFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CAP45 V2 peptide A 19 Homo Sapiens , Human Immunodeficiency Virus 1 ELRDKKQKAYALFYRPDVV
CAP45 V2 peptide P 19 Homo Sapiens , Human Immunodeficiency Virus 1 ELRDKKQKAYALFYRPDVV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-03-10
Deposition Author(s): Dirr, H.W. , Fernandes, M. , Moore, P.L. , Morris, L. , Sayed, Y. , Vijayakumar, B. , Wibmer, C.K.