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6FI8

Crystal structure of the is608 transposase in complex with left end 29-mer dna hairpin and a 6-mer dna representing the intact target site: pre-cleavage target capture complex

PDB DOI: 10.2210/pdb6fi8/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Helicobacter Pylori , Synthetic Construct

Deposited: 2018-01-17
Deposition Author(s): Barabas, O. , Morero, N.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.598 Å

Literature

Crystal structure of the is608 transposase in complex with left end 29-mer dna hairpin and a 6-mer dna representing the intact target site: pre-cleavage target capture complex

Barabas, O. , Morero, N.R.

Primary Citation of Related Structures: 6FI8


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative transposase A 159 Helicobacter Pylori , Synthetic Construct GSAMASNAVLYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLKTKLPTLWTNSCFISTVGGAPLNVVKQYIENQQNSNRPKQKEKWKSYVDNLQTKAL
Putative transposase B 159 Helicobacter Pylori , Synthetic Construct GSAMASNAVLYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLKTKLPTLWTNSCFISTVGGAPLNVVKQYIENQQNSNRPKQKEKWKSYVDNLQTKAL
Putative transposase G 159 Helicobacter Pylori , Synthetic Construct GSAMASNAVLYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLKTKLPTLWTNSCFISTVGGAPLNVVKQYIENQQNSNRPKQKEKWKSYVDNLQTKAL
Putative transposase H 159 Helicobacter Pylori , Synthetic Construct GSAMASNAVLYKSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHLKTKLPTLWTNSCFISTVGGAPLNVVKQYIENQQNSNRPKQKEKWKSYVDNLQTKAL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA 29-MER (LE29) c 29 NA AAAGCCCCTAGCTTTTAGCTATGGGGATA
DNA 29-MER (LE29) d 29 NA AAAGCCCCTAGCTTTTAGCTATGGGGATA
DNA 29-MER (LE29) i 29 NA AAAGCCCCTAGCTTTTAGCTATGGGGATA
DNA 29-MER (LE29) j 29 NA AAAGCCCCTAGCTTTTAGCTATGGGGATA
DNA 6-MER (T6') e 6 NA ATTACC
DNA 6-MER (T6') f 6 NA ATTACC
DNA 6-MER (T6') k 6 NA ATTACC
DNA 6-MER (T6') l 6 NA ATTACC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-01-17
Deposition Author(s): Barabas, O. , Morero, N.R.