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FASTA Sequence PDB Format mmCIF Format
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6EWB

Crystal structure of gii.4 unsw 2012 p domain in complex with fab 10e9

PDB DOI: 10.2210/pdb6ewb/pdb

Classification: VIRAL PROTEIN
Organism(s): Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au

Deposited: 2017-11-03
Deposition Author(s): Hansman, G.S. , Koromyslova, A.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.78 Å

6ewb
Literature

Crystal structure of gii.4 unsw 2012 p domain in complex with fab 10e9

Hansman, G.S. , Koromyslova, A.D.

Primary Citation of Related Structures: 6EWB


Proteins
Molecule Chains Sequence Length Organism Sequence
VP1 A 310 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GPGSKPFSVPVLTVEEMTNSRFPIPLEKLFTGPSSAFVVQPQNGRCTTDGVLLGTTQLSPVNICTFRGDVTHITGSRNYTMNLASQNWNDYDPTEEIPAPLGTPDFVGKIQGVLTQTTRTDGSTRGHKATVYTGSADFAPKLGRVQFETDTDRDFEANQNTKFTPVGVIQDGGTTHRNEPQQWVLPSYSGRNTHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMDLDCLLPQEWVQYFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPM
VP1 B 310 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GPGSKPFSVPVLTVEEMTNSRFPIPLEKLFTGPSSAFVVQPQNGRCTTDGVLLGTTQLSPVNICTFRGDVTHITGSRNYTMNLASQNWNDYDPTEEIPAPLGTPDFVGKIQGVLTQTTRTDGSTRGHKATVYTGSADFAPKLGRVQFETDTDRDFEANQNTKFTPVGVIQDGGTTHRNEPQQWVLPSYSGRNTHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMDLDCLLPQEWVQYFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPM
VP1 C 310 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GPGSKPFSVPVLTVEEMTNSRFPIPLEKLFTGPSSAFVVQPQNGRCTTDGVLLGTTQLSPVNICTFRGDVTHITGSRNYTMNLASQNWNDYDPTEEIPAPLGTPDFVGKIQGVLTQTTRTDGSTRGHKATVYTGSADFAPKLGRVQFETDTDRDFEANQNTKFTPVGVIQDGGTTHRNEPQQWVLPSYSGRNTHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMDLDCLLPQEWVQYFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPM
VP1 D 310 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GPGSKPFSVPVLTVEEMTNSRFPIPLEKLFTGPSSAFVVQPQNGRCTTDGVLLGTTQLSPVNICTFRGDVTHITGSRNYTMNLASQNWNDYDPTEEIPAPLGTPDFVGKIQGVLTQTTRTDGSTRGHKATVYTGSADFAPKLGRVQFETDTDRDFEANQNTKFTPVGVIQDGGTTHRNEPQQWVLPSYSGRNTHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMDLDCLLPQEWVQYFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPM
Fab heavy chain E 216 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au QVQLQQSGAELMKPGASVKISCTATGYTFITYWIQWVKQRPGHGLEWIGETLPGSGSTNYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAIYYCARIGRSNDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Fab heavy chain G 216 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au QVQLQQSGAELMKPGASVKISCTATGYTFITYWIQWVKQRPGHGLEWIGETLPGSGSTNYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAIYYCARIGRSNDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Fab heavy chain H 216 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au QVQLQQSGAELMKPGASVKISCTATGYTFITYWIQWVKQRPGHGLEWIGETLPGSGSTNYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAIYYCARIGRSNDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Fab heavy chain J 216 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au QVQLQQSGAELMKPGASVKISCTATGYTFITYWIQWVKQRPGHGLEWIGETLPGSGSTNYNEKFKGKATFTADTSSNTAYMQLSSLTSEDSAIYYCARIGRSNDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Fab light chain F 214 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GQIVLTQSPTIMSASPGEKVTMTCSASSSVDYMHWYQQKSGTSPKRWIYDTYKLASGVPARFSGSGSGTSYSLTINSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Fab light chain I 214 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GQIVLTQSPTIMSASPGEKVTMTCSASSSVDYMHWYQQKSGTSPKRWIYDTYKLASGVPARFSGSGSGTSYSLTINSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Fab light chain K 214 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GQIVLTQSPTIMSASPGEKVTMTCSASSSVDYMHWYQQKSGTSPKRWIYDTYKLASGVPARFSGSGSGTSYSLTINSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Fab light chain L 214 Mus Musculus , Norovirus Hu/Gii.4/Sydney/Nsw0514/2012/Au GQIVLTQSPTIMSASPGEKVTMTCSASSSVDYMHWYQQKSGTSPKRWIYDTYKLASGVPARFSGSGSGTSYSLTINSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-11-03
Deposition Author(s): Hansman, G.S. , Koromyslova, A.D.