6ES3
Structure of cdx2-dna(tcg)
PDB DOI: 10.2210/pdb6es3/pdb
Classification: TRANSCRIPTION Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2017-10-19 Deposition Author(s): Jolma, A. , Morgunova, E. , Popov, A. , Taipale, J. , Yin, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.57 Å
Structure of cdx2-dna(tcg)
Jolma, A. , Morgunova, E. , Popov, A. , Taipale, J. , Yin, Y.
Primary Citation of Related Structures: 6ES3
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*CP*CP*TP*CP*C)-3') | a | 18 | NA | TTGTGTTTTACGACCTCC |
| DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*CP*CP*TP*CP*C)-3') | b | 18 | NA | TTGTGTTTTACGACCTCC |
| DNA (5'-D(P*GP*GP*AP*GP*GP*TP*CP*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | f | 18 | NA | GGAGGTCGTAAAACACAA |
| DNA (5'-D(P*GP*GP*AP*GP*GP*TP*CP*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3') | e | 18 | NA | GGAGGTCGTAAAACACAA |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Homeobox protein CDX-2 | K | 72 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ |
| Homeobox protein CDX-2 | M | 72 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQ |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-10-19 Deposition Author(s): Jolma, A. , Morgunova, E. , Popov, A. , Taipale, J. , Yin, Y.