6DWZ
Hermes transposase deletion dimer complex with (c/g) dna
PDB DOI: 10.2210/pdb6dwz/pdb
Classification: dna binding protein/dna Organism(s): Musca Domestica , Synthetic Construct
Deposited: 2018-06-28 Deposition Author(s): Dyda, F. , Hickman, A.B.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.2 Å
Hermes transposase deletion dimer complex with (c/g) dna
Primary Citation of Related Structures: 6DWZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Hermes transposase | A | 517 | Musca Domestica , Synthetic Construct | GSHMSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALISREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKPVSPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFCKLDI |
| Hermes transposase | E | 517 | Musca Domestica , Synthetic Construct | GSHMSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALISREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEKVAQIKEFCLSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKPVSPSDEFEFYRKEIVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFCKLDI |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*AP*GP*AP*AP*CP*AP*AP*CP*AP*AP*CP*AP*AP*G)-3') | b | 15 | NA | GAGAACAACAACAAG |
| DNA (5'-D(*GP*AP*GP*AP*AP*CP*AP*AP*CP*AP*AP*CP*AP*AP*G)-3') | f | 15 | NA | GAGAACAACAACAAG |
| DNA (26-MER) | c | 26 | NA | CTTGTTGTTGTTCTCTGGGTCACGCG |
| DNA (26-MER) | g | 26 | NA | CTTGTTGTTGTTCTCTGGGTCACGCG |
| DNA (5'-D(*GP*CP*GP*TP*GP*AP*C)-3') | d | 7 | NA | GCGTGAC |
| DNA (5'-D(*GP*CP*GP*TP*GP*AP*C)-3') | h | 7 | NA | GCGTGAC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2018-06-28 Deposition Author(s): Dyda, F. , Hickman, A.B.