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6DRT

Crystal structure of the processivity clamp gp45 complexed with recognition peptide of ligase from bacteriophage t4

PDB DOI: 10.2210/pdb6drt/pdb

Classification: GENE REGULATION
Organism(s): Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2018-06-13
Deposition Author(s): Aihara, H. , Shi, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.117 Å

6drt
Literature

Crystal structure of the processivity clamp gp45 complexed with recognition peptide of ligase from bacteriophage t4

Aihara, H. , Shi, K.

Primary Citation of Related Structures: 6DRT


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase clamp A 236 Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDFLEHHHHHH
DNA polymerase clamp B 236 Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDFLEHHHHHH
DNA polymerase clamp C 236 Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDFDVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTVVAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVINGFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWAKGKQGAAKFEGEHANYVVALEADSTHDFLEHHHHHH
GP45 recognition loop D 13 Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) KKEPEGLDFLFDA
GP45 recognition loop E 13 Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) KKEPEGLDFLFDA
GP45 recognition loop F 13 Bartonella Clarridgeiae , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) KKEPEGLDFLFDA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-06-13
Deposition Author(s): Aihara, H. , Shi, K.