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6DB7

Crystal structure of anti-hiv-1 v3 fab 1334 in complex with a hiv-1 gp120 v3 peptide from mn strain

PDB DOI: 10.2210/pdb6db7/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2018-05-02
Deposition Author(s): Chan, K.-W. , Kong, X.-P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.213 Å

6db7
Literature

Crystal structure of anti-hiv-1 v3 fab 1334 in complex with a hiv-1 gp120 v3 peptide from mn strain

Chan, K.-W. , Kong, X.-P.

Primary Citation of Related Structures: 6DB7


Proteins
Molecule Chains Sequence Length Organism Sequence
Human monoclonal anti-HIV-1 gp120 V3 antibody 1334 Fab heavy chain H 238 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QVQLVQSGAEVKKPGASVKVSCEASGYTFAKFAIHWVRQAPRQGLEWMGWINGDDGKTEYSQKFQDRVTMTRDTSASTVYMELSSLRSEDTALYYCARAMYPDTVTGNDNPAPPPFEGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Human monoclonal anti-HIV-1 gp120 V3 antibody 1334 Fab heavy chain I 238 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) QVQLVQSGAEVKKPGASVKVSCEASGYTFAKFAIHWVRQAPRQGLEWMGWINGDDGKTEYSQKFQDRVTMTRDTSASTVYMELSSLRSEDTALYYCARAMYPDTVTGNDNPAPPPFEGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
Human monoclonal anti-HIV-1 gp120 V3 antibody 1334 Fab light chain L 214 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SYELTQPPSVSVSPGQTARITCSGDALPKEYAYWYQQKSGQAPVLVIYEDTRRPSGIPERFSGSSSGTMATLTVSGAHVDDEADYYCYSRDTSANQWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Human monoclonal anti-HIV-1 gp120 V3 antibody 1334 Fab light chain M 214 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SYELTQPPSVSVSPGQTARITCSGDALPKEYAYWYQQKSGQAPVLVIYEDTRRPSGIPERFSGSSSGTMATLTVSGAHVDDEADYYCYSRDTSANQWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
HIV-1 gp120 V3 peptide from MN strain P 23 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) YNKRKRIHIGPGRAFYTTKNIIG
HIV-1 gp120 V3 peptide from MN strain Q 23 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) YNKRKRIHIGPGRAFYTTKNIIG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-05-02
Deposition Author(s): Chan, K.-W. , Kong, X.-P.