6D7J
The crystal structure of parabacteroides merdae beta-glucuronidase (gus) with glycerol in active-site
PDB DOI: 10.2210/pdb6d7j/pdb
Classification: HYDROLASE Organism(s): Parabacteroides Merdae Cl03T12C32
Deposited: 2018-04-24 Deposition Author(s): Little, M.S. , Redinbo, M.R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.24 Å
The crystal structure of parabacteroides merdae beta-glucuronidase (gus) with glycerol in active-site
Primary Citation of Related Structures: 6D7J
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Beta-Glucuronidase | A | 830 | Parabacteroides Merdae Cl03T12C32 | HHHHHHSSGVDLGTENLYFQSNAKVPAMNKIRLTNNWEYLKGDLGGIWEAVRPAAPGSSEAVPIWQPVTLPHCFNAEDAVDPDVNYYEGPGWYKTLLAIDNPYRNGRIVLDFDGAGQKTDVYVYTTHVGSHVGGYDSWNVDITDAVKAFLGSKDAERFKGKVPLSIRCDNSRDLEMIPSDLADFNIYGGLYRYLNLVYLPEVSFEQIHLESSLSSNLKEGILKVKTSFYNPEDIRKADVTVSVYDVDRKPVFSKTLEGILPLGDQLLAKMKIKNPVLWDVDVPQLYTCELTVKTPDQTFTTEERFGFRHTEFKDKGPFFLNGKRLLLRGTHRHEDHAGVAQAMTEDMMRREMRMMKDMGVNFIRLGHYQQSEIILDLCDELGILVWEEIPWCRGGLGGDVYKKQARRMLANMIVQHHNHPAVIIWGLGNENDWPNDFNTFDKSAIRAFMKELHDMAHRLDDTRMTAIRRCEFCNDIVDVYSPSIWAGWYRGVFTDYKSISEQEMQKVKHFLHVEWGGDSHARRHSEDAFYNLKNIEAGKGGDERAGDASLYGGVPRASRDGDWSESYVVRLIDWHLKEQETMPWLTGTAYWPFKDFSTPVRPDNPVPYVNQKGVVERDFTPKESYYVFQSYWTEKPMIHIYGHTWPVRWGGKDDRKEILVYSNCDEVELFVNGVSQGVKRRNSQDYPAAGLRWNCVYQEGMNEIRAVGVKKKEKKEVSDVIRQEYQTAKWDKEAACQVSLLSEEGDTALVQVQLIDKNGIRCLSSKKQITFEIAGDGSLICNLGTSTGSRKVQAYNGRALIRIKRNEGNSVVAVKSEGLPTAFLELKSPK |
| Beta-Glucuronidase | B | 830 | Parabacteroides Merdae Cl03T12C32 | HHHHHHSSGVDLGTENLYFQSNAKVPAMNKIRLTNNWEYLKGDLGGIWEAVRPAAPGSSEAVPIWQPVTLPHCFNAEDAVDPDVNYYEGPGWYKTLLAIDNPYRNGRIVLDFDGAGQKTDVYVYTTHVGSHVGGYDSWNVDITDAVKAFLGSKDAERFKGKVPLSIRCDNSRDLEMIPSDLADFNIYGGLYRYLNLVYLPEVSFEQIHLESSLSSNLKEGILKVKTSFYNPEDIRKADVTVSVYDVDRKPVFSKTLEGILPLGDQLLAKMKIKNPVLWDVDVPQLYTCELTVKTPDQTFTTEERFGFRHTEFKDKGPFFLNGKRLLLRGTHRHEDHAGVAQAMTEDMMRREMRMMKDMGVNFIRLGHYQQSEIILDLCDELGILVWEEIPWCRGGLGGDVYKKQARRMLANMIVQHHNHPAVIIWGLGNENDWPNDFNTFDKSAIRAFMKELHDMAHRLDDTRMTAIRRCEFCNDIVDVYSPSIWAGWYRGVFTDYKSISEQEMQKVKHFLHVEWGGDSHARRHSEDAFYNLKNIEAGKGGDERAGDASLYGGVPRASRDGDWSESYVVRLIDWHLKEQETMPWLTGTAYWPFKDFSTPVRPDNPVPYVNQKGVVERDFTPKESYYVFQSYWTEKPMIHIYGHTWPVRWGGKDDRKEILVYSNCDEVELFVNGVSQGVKRRNSQDYPAAGLRWNCVYQEGMNEIRAVGVKKKEKKEVSDVIRQEYQTAKWDKEAACQVSLLSEEGDTALVQVQLIDKNGIRCLSSKKQITFEIAGDGSLICNLGTSTGSRKVQAYNGRALIRIKRNEGNSVVAVKSEGLPTAFLELKSPK |
| Beta-Glucuronidase | C | 830 | Parabacteroides Merdae Cl03T12C32 | HHHHHHSSGVDLGTENLYFQSNAKVPAMNKIRLTNNWEYLKGDLGGIWEAVRPAAPGSSEAVPIWQPVTLPHCFNAEDAVDPDVNYYEGPGWYKTLLAIDNPYRNGRIVLDFDGAGQKTDVYVYTTHVGSHVGGYDSWNVDITDAVKAFLGSKDAERFKGKVPLSIRCDNSRDLEMIPSDLADFNIYGGLYRYLNLVYLPEVSFEQIHLESSLSSNLKEGILKVKTSFYNPEDIRKADVTVSVYDVDRKPVFSKTLEGILPLGDQLLAKMKIKNPVLWDVDVPQLYTCELTVKTPDQTFTTEERFGFRHTEFKDKGPFFLNGKRLLLRGTHRHEDHAGVAQAMTEDMMRREMRMMKDMGVNFIRLGHYQQSEIILDLCDELGILVWEEIPWCRGGLGGDVYKKQARRMLANMIVQHHNHPAVIIWGLGNENDWPNDFNTFDKSAIRAFMKELHDMAHRLDDTRMTAIRRCEFCNDIVDVYSPSIWAGWYRGVFTDYKSISEQEMQKVKHFLHVEWGGDSHARRHSEDAFYNLKNIEAGKGGDERAGDASLYGGVPRASRDGDWSESYVVRLIDWHLKEQETMPWLTGTAYWPFKDFSTPVRPDNPVPYVNQKGVVERDFTPKESYYVFQSYWTEKPMIHIYGHTWPVRWGGKDDRKEILVYSNCDEVELFVNGVSQGVKRRNSQDYPAAGLRWNCVYQEGMNEIRAVGVKKKEKKEVSDVIRQEYQTAKWDKEAACQVSLLSEEGDTALVQVQLIDKNGIRCLSSKKQITFEIAGDGSLICNLGTSTGSRKVQAYNGRALIRIKRNEGNSVVAVKSEGLPTAFLELKSPK |
| Beta-Glucuronidase | D | 830 | Parabacteroides Merdae Cl03T12C32 | HHHHHHSSGVDLGTENLYFQSNAKVPAMNKIRLTNNWEYLKGDLGGIWEAVRPAAPGSSEAVPIWQPVTLPHCFNAEDAVDPDVNYYEGPGWYKTLLAIDNPYRNGRIVLDFDGAGQKTDVYVYTTHVGSHVGGYDSWNVDITDAVKAFLGSKDAERFKGKVPLSIRCDNSRDLEMIPSDLADFNIYGGLYRYLNLVYLPEVSFEQIHLESSLSSNLKEGILKVKTSFYNPEDIRKADVTVSVYDVDRKPVFSKTLEGILPLGDQLLAKMKIKNPVLWDVDVPQLYTCELTVKTPDQTFTTEERFGFRHTEFKDKGPFFLNGKRLLLRGTHRHEDHAGVAQAMTEDMMRREMRMMKDMGVNFIRLGHYQQSEIILDLCDELGILVWEEIPWCRGGLGGDVYKKQARRMLANMIVQHHNHPAVIIWGLGNENDWPNDFNTFDKSAIRAFMKELHDMAHRLDDTRMTAIRRCEFCNDIVDVYSPSIWAGWYRGVFTDYKSISEQEMQKVKHFLHVEWGGDSHARRHSEDAFYNLKNIEAGKGGDERAGDASLYGGVPRASRDGDWSESYVVRLIDWHLKEQETMPWLTGTAYWPFKDFSTPVRPDNPVPYVNQKGVVERDFTPKESYYVFQSYWTEKPMIHIYGHTWPVRWGGKDDRKEILVYSNCDEVELFVNGVSQGVKRRNSQDYPAAGLRWNCVYQEGMNEIRAVGVKKKEKKEVSDVIRQEYQTAKWDKEAACQVSLLSEEGDTALVQVQLIDKNGIRCLSSKKQITFEIAGDGSLICNLGTSTGSRKVQAYNGRALIRIKRNEGNSVVAVKSEGLPTAFLELKSPK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2018-04-24 Deposition Author(s): Little, M.S. , Redinbo, M.R.