6D5F
Cryo-em reconstruction of membrane-enveloped filamentous virus sfv1 (sulfolobus filamentous virus 1)
PDB DOI: 10.2210/pdb6d5f/pdb
Classification: VIRUS Organism(s): Sulfolobus Filamentous Virus 1
Deposited: 2018-04-19 Deposition Author(s): Egelman, E.H. , Krupovic, M. , Liu, Y. , Osinski, T. , Prangishvili, D. , Wang, F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.7 Å
Cryo-em reconstruction of membrane-enveloped filamentous virus sfv1 (sulfolobus filamentous virus 1)
Egelman, E.H. , Krupovic, M. , Liu, Y. , Osinski, T. , Prangishvili, D. , Wang, F.
Primary Citation of Related Structures: 6D5F
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fimbrial protein | A | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | B | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | C | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | D | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | E | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | F | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | G | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | H | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | I | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | J | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | K | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | L | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | M | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | N | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | O | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | P | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | Q | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | R | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | S | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | T | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | U | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | V | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | W | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | X | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | Y | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Fimbrial protein | Z | 137 | Sulfolobus Filamentous Virus 1 | MPSRRTGITTEDAITKYSVKAKTEQTAYKNATKDMVVQAQNIMNFYSVVNQALIPWLNAHGVGGNLRILYRQLANEYVKVLNTKQSGEVIKRLKIALRHKYWLRGLDEAMLDEFMDYIDSLKSTTTNYIIFNMQSSK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (336-MER) | 1 | 336 | NA | TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA |
| DNA (336-MER) | 2 | 336 | NA | TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-04-19 Deposition Author(s): Egelman, E.H. , Krupovic, M. , Liu, Y. , Osinski, T. , Prangishvili, D. , Wang, F.