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6D2P

Crystal structure of ioma-class clk31 fab from an hiv-1 naive donor in complex with a germline-targeting gp120 engineered outer domain eod-gt8 at 2.6 a

PDB DOI: 10.2210/pdb6d2p/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens

Deposited: 2018-04-13
Deposition Author(s): Sarkar, A. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

6d2p
Literature

Crystal structure of ioma-class clk31 fab from an hiv-1 naive donor in complex with a germline-targeting gp120 engineered outer domain eod-gt8 at 2.6 a

Sarkar, A. , Wilson, I.A.

Primary Citation of Related Structures: 6D2P


Proteins
Molecule Chains Sequence Length Organism Sequence
Germline-targeting HIV-1 gp120 engineered outer domain eOD-GT8 C 183 Homo Sapiens TGDTITLPCRPAPPPHCSSNITGLILTRQGGYSNANTVIFRPSGGDWRDIARCQIAGTVVSTQLFLNGSLAEEEVVIRSEDWRDNAKSICVQLATSVEIACTGAGHCAISRAKWANTLKQIASKLREQYGAKTIIFKPSSGGDPEFVNHSFNCGGEFFYCASTQLFASTWFASTGTKHHHHHH
IOMAclass naive CLK31 Fab heavy chain H 221 Homo Sapiens QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARSLGRDWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
IOMAclass naive CLK31 Fab light chain L 214 Homo Sapiens QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-04-13
Deposition Author(s): Sarkar, A. , Wilson, I.A.