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FASTA Sequence PDB Format mmCIF Format
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6CXC

3.9a cryo-em structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein

PDB DOI: 10.2210/pdb6cxc/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus

Deposited: 2018-04-02
Deposition Author(s): Chen, X. , Ma, J. , Ni, F. , Wang, Q. , Wang, Z. , Xie, Q.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

6cxc
Literature

3.9a cryo-em structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein

Chen, X. , Ma, J. , Ni, F. , Wang, Q. , Wang, Z. , Xie, Q.

Primary Citation of Related Structures: 6CXC


Proteins
Molecule Chains Sequence Length Organism Sequence
R4.C6 Fab Heavy Chain X 118 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus MAEVQLQQSGPELVKPGASVKISCKASGYAFSNSWMSWVKQRPGKGLEWIGRLFPADGDITYNGHFKDKAALTADKSSNTAYIQLSSLTSEDSAVYFCARMDNSEVFWGQGTLVTVSA
R4.C6 Fab Heavy Chain G 118 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus MAEVQLQQSGPELVKPGASVKISCKASGYAFSNSWMSWVKQRPGKGLEWIGRLFPADGDITYNGHFKDKAALTADKSSNTAYIQLSSLTSEDSAVYFCARMDNSEVFWGQGTLVTVSA
R4.C6 Fab Heavy Chain I 118 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus MAEVQLQQSGPELVKPGASVKISCKASGYAFSNSWMSWVKQRPGKGLEWIGRLFPADGDITYNGHFKDKAALTADKSSNTAYIQLSSLTSEDSAVYFCARMDNSEVFWGQGTLVTVSA
R4.C6 Fab Light Chain Y 122 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus MADILLTQSQKFMSTSVGDRVSITCKASQNVRTGVSWYQRKPGQSPKALIYLASNRHTGVPDRFTGRGSGTDFTLTISEVQSEDLADYFCLQHWTVPYTFGGGTKLEIKRTAAAPSRANSFK
R4.C6 Fab Light Chain J 122 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus MADILLTQSQKFMSTSVGDRVSITCKASQNVRTGVSWYQRKPGQSPKALIYLASNRHTGVPDRFTGRGSGTDFTLTISEVQSEDLADYFCLQHWTVPYTFGGGTKLEIKRTAAAPSRANSFK
R4.C6 Fab Light Chain K 122 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus MADILLTQSQKFMSTSVGDRVSITCKASQNVRTGVSWYQRKPGQSPKALIYLASNRHTGVPDRFTGRGSGTDFTLTISEVQSEDLADYFCLQHWTVPYTFGGGTKLEIKRTAAAPSRANSFK
Fusion glycoprotein F0, Envelope glycoprotein chimera A 548 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKQKQQFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAGKSTTNIMGALVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSHHHHHH
Fusion glycoprotein F0, Envelope glycoprotein chimera B 548 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKQKQQFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAGKSTTNIMGALVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSHHHHHH
Fusion glycoprotein F0, Envelope glycoprotein chimera C 548 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKQKQQFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAGKSTTNIMGALVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSHHHHHH
Fusion glycoprotein F0, Envelope glycoprotein chimera D 548 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKQKQQFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAGKSTTNIMGALVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSHHHHHH
Fusion glycoprotein F0, Envelope glycoprotein chimera E 548 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKQKQQFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAGKSTTNIMGALVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSHHHHHH
Fusion glycoprotein F0, Envelope glycoprotein chimera F 548 Human Immunodeficiency Virus 1 , Human Respiratory Syncytial Virus A (Strain A2) , Mus Musculus QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKQKQQFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAGKSTTNIMGALVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-04-02
Deposition Author(s): Chen, X. , Ma, J. , Ni, F. , Wang, Q. , Wang, Z. , Xie, Q.