6CMO
Rhodopsin-gi complex
PDB DOI: 10.2210/pdb6cmo/pdb
Classification: SIGNALING PROTEIN Organism(s): Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct
Deposited: 2018-03-05 Deposition Author(s): Bartesaghi, A. , De Waal, P.W. , Dutka, P. , Earnst, O.P. , Erramilli, S. , Gu, X. , Jiang, Y. , Kang, Y. , Kossiakoff, A.A. , Kuybeda, O. , Liu, P. , Melcher, K. , Meng, X. , Morizumi, T. , Mukherjee, S. , Subramaniam, S. , Van Eps, N. , Xu, H.E. , Yin, Y. , Zhao, G. , Zhou, X.E.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.5 Å
Rhodopsin-gi complex
Bartesaghi, A. , De Waal, P.W. , Dutka, P. , Earnst, O.P. , Erramilli, S. , Gu, X. , Jiang, Y. , Kang, Y. , Kossiakoff, A.A. , Kuybeda, O. , Liu, P. , Melcher, K. , Meng, X. , Morizumi, T. , Mukherjee, S. , Subramaniam, S. , Van Eps, N. , Xu, H.E. , Yin, Y. , Zhao, G. , Zhou, X.E.
Primary Citation of Related Structures: 6CMO
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| chimera protein of Soluble cytochrome b562 and Rhodopsin | R | 463 | Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct | FADYKDDDDAKLQTMHHHHHHHHHHENLYFQGGTADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLMCGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHQGSCFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICC |
| Guanine nucleotide-binding protein G(i) subunit alpha-1 | A | 354 | Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct | MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCSTDTKNVQFVFDAVTDVIIKNNLKDCGLF |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 345 | Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct | MGSLLQSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | G | 68 | Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFC |
| Fab light chain | L | 215 | Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Fab Heavy chain | H | 239 | Bos Taurus , Escherichia Coli , Homo Sapiens , Rattus Norvegicus , Synthetic Construct | EISEVQLVESGGGLVQPGGSLRLSCAASGFNFYYSSIHWVRQAPGKGLEWVASIYSYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYPWYWWMEKPYLSLYGMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-03-05 Deposition Author(s): Bartesaghi, A. , De Waal, P.W. , Dutka, P. , Earnst, O.P. , Erramilli, S. , Gu, X. , Jiang, Y. , Kang, Y. , Kossiakoff, A.A. , Kuybeda, O. , Liu, P. , Melcher, K. , Meng, X. , Morizumi, T. , Mukherjee, S. , Subramaniam, S. , Van Eps, N. , Xu, H.E. , Yin, Y. , Zhao, G. , Zhou, X.E.