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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6CHS

Cdc48-npl4 complex in the presence of atp-gamma-s

PDB DOI: 10.2210/pdb6chs/pdb

Classification: MOTOR PROTEIN
Organism(s): Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719)

Deposited: 2018-02-22
Deposition Author(s): Bodnar, N.O. , Kim, K.H. , Rapoport, T.A. , Walz, T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.3 Å

6chs
Literature

Cdc48-npl4 complex in the presence of atp-gamma-s

Bodnar, N.O. , Kim, K.H. , Rapoport, T.A. , Walz, T.

Primary Citation of Related Structures: 6CHS


Proteins
Molecule Chains Sequence Length Organism Sequence
Npl4 A 659 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MLLRMRCPDGMFRLTVEKDDTFGELVRQLVPKLPPTVDPKSITLSNHPSGGDSKRIDEIARFKIGQVGHGDLIFVRYQTSDTVANGRSVDISSQTAGLSSSANRLNGKPVLPTEDHPIDPPPNTSAERIKNPWEVVRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINSATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRFLDAWRRTGVQRLGILYGRYLEYDAVPLGIKAVVEAIYEPPQVDEIDGITLNPWENEQEVNQVAKYCGLEQVGVIWTDLLDAGKGDGSVVCKRHADSYFLAAQEIVFAARLQAQHPKPSKWSDTGRFGSNFVTCVVSGNEQGEISISAYQMSNDAVEMVRADIIEPSADPTLMLVREEEEDDGSPSKTRYIPEVFYRKINEYGANVLENAKPAFPVEYLFVTLTHGFPDSPSPLFTDNIFPIENREYVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEEEALLCRVATLHDLAESFQLRSTTGWQTLHMILQSTGERVPKRPRFSDNVPSSSQDTQEALGGNNLDPGEPLAKRFAAVRLNENNQSSPKPYAPSRWNL
Putative cell division control protein H 819 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MAPESKDHKKKVNLTDPSGAEHREENDTATAILKKKKKPNQLMVTDAVNDDNSIIALSNNTMEALQLFRGDTVLVRGKKRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIPREEEENNLNEVGYDDIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEAFAQQMKNAGPGAFFKFPDSTTDNSASNAAGNSFGDAGNDDDLYT
Putative cell division control protein I 819 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MAPESKDHKKKVNLTDPSGAEHREENDTATAILKKKKKPNQLMVTDAVNDDNSIIALSNNTMEALQLFRGDTVLVRGKKRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIPREEEENNLNEVGYDDIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEAFAQQMKNAGPGAFFKFPDSTTDNSASNAAGNSFGDAGNDDDLYT
Putative cell division control protein J 819 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MAPESKDHKKKVNLTDPSGAEHREENDTATAILKKKKKPNQLMVTDAVNDDNSIIALSNNTMEALQLFRGDTVLVRGKKRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIPREEEENNLNEVGYDDIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEAFAQQMKNAGPGAFFKFPDSTTDNSASNAAGNSFGDAGNDDDLYT
Putative cell division control protein D 819 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MAPESKDHKKKVNLTDPSGAEHREENDTATAILKKKKKPNQLMVTDAVNDDNSIIALSNNTMEALQLFRGDTVLVRGKKRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIPREEEENNLNEVGYDDIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEAFAQQMKNAGPGAFFKFPDSTTDNSASNAAGNSFGDAGNDDDLYT
Putative cell division control protein E 819 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MAPESKDHKKKVNLTDPSGAEHREENDTATAILKKKKKPNQLMVTDAVNDDNSIIALSNNTMEALQLFRGDTVLVRGKKRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIPREEEENNLNEVGYDDIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEAFAQQMKNAGPGAFFKFPDSTTDNSASNAAGNSFGDAGNDDDLYT
Putative cell division control protein F 819 Chaetomium Thermophilum (Strain Dsm 1495 / Cbs 144.50 / Imi 039719) MAPESKDHKKKVNLTDPSGAEHREENDTATAILKKKKKPNQLMVTDAVNDDNSIIALSNNTMEALQLFRGDTVLVRGKKRRDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIPREEEENNLNEVGYDDIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEAFAQQMKNAGPGAFFKFPDSTTDNSASNAAGNSFGDAGNDDDLYT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-02-22
Deposition Author(s): Bodnar, N.O. , Kim, K.H. , Rapoport, T.A. , Walz, T.