PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6CFW

Cryoem structure of a respiratory membrane-bound hydrogenase

PDB DOI: 10.2210/pdb6cfw/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1

Deposited: 2018-02-17
Deposition Author(s): Li, H.L. , Yu, H.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.7 Å

6cfw
Literature

Cryoem structure of a respiratory membrane-bound hydrogenase

Li, H.L. , Yu, H.J.

Primary Citation of Related Structures: 6CFW


Proteins
Molecule Chains Sequence Length Organism Sequence
Monovalent cation/H+ antiporter subunit D H 510 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MTWLPFIIIIPLLGAFSMPIVSLLKGKAKEIWASMISFATLIVGIQVFREVWSKGTIVYTLGAPNPFGKATFPIRIVWEVDKFGALMVLIVTFVSFLAVIYSIEYMKHDTGLEKFYTLILILELGMLGIAITGDIFNFYVFLEIMSIASYALVAFRNDTWEGIEAGIKYMFAGSLASSFVLLGIALLYGQYGTLTMGYLAVKIAENPTIVAKVALALFIGGLLFKSGAAPVHMWLADAHPAAPSSISAMLSGLVIKIGGIYAIARIVFSIFSPTINLGTIGWIIIIFACITLIVGNAMAVVQEDLKRLLAYSSVGQIGYILLGLGIGMVAYGTRVGEIALAGAIYHTVNHALMKALLFLVAGAVIHEIGTRNMNELSGLAKTMPKTTFAFLIGAAAIVGLPPLNGFASKWLIYESSALFNPILGAIAVIGTVFCTAAYVRALFTFFGRPSEKVTNARDPGIAMMLPMIILVVTIIVMGFFPWQISDRIMVPTARALWDVIDYISSLMGGG
Monovalent cation/H+ antiporter subunit F B 84 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MIFFYATLLIGIAGIITFIRLALGPTVPDRVVAVDTLNTLIVAIMLLLGAAYERAIYIDIAIVYALLSYVGTLVIAKYLQGGLQ
Probable membrane-bound hydrogenase subunit mbhJ J 167 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MTNNSERKRLEKRIAQLCKFIGRSPWVFHVNSGSCNGCDIEIIAALTPRYDAERFGVKLVGSPRHADILLVTGPVTNQSLERVKLVYEQTPDPKIVIAIGACPTGGSVFYESPFTNAPLDRIIPVDVFVPGCPPRPEAILHGVVLALEKLAKMIKGEVPPEEGEENE
Membrane-bound hydrogenase subunit beta K 173 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MSKAEMVANKIKERFPNAEVVVKTNKWGRERVWVRISREEYKELMKFIRELDPEAHYSIGIEQDWGDELGFLNHILLFYDEPPGVSLLIDVHAPKDNPVLPDTSDIFPISLQFEREGMEMVGLDFEGAPDKRRLFLPDDFPEGIYPLRTDEKGVPEEMVKNAGHPYLLRREKK
Membrane-bound hydrogenase subunit alpha L 380 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MKKVEYWVKIPFGPIHPGLEEPEKFIITLDGERIVNVDVKLGYNLRGVQWIGMRRNYVQIMYLAERMCGICSFSHNHTYVRAVEEMAGIEVPERAEYIRVIVGELERIHSHLLNLGVVGHDIGYDTVLHLTWLARERVMDVLEAVSGNRVNYSMVTIGGVRRDIGEKQKRLILDMIKYYREVLPQIEDVFLHDSTIEARLRDVAVVPKKLAIEMGAVGPTARGSGIKEDSRWSEQLGVYPDLGIKPVTPEDVTGEKARGDVYDRMAVRIGELWMSLDLLEHALDQMPEGKIKTFPKDNILVAKLKLLGDGEGIGRYEAPRGELVHYVRGQKGRDGPVRWKPREPTFPNLFTIAKALEGNELADLVVAIASIDPCLSCTDR
NADH-plastoquinone oxidoreductase subunit N 139 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MIRLPLLPTVIKNLFKKPATNPFPKTEPVPVPEDFRGKLVYNVDKCVGCRMCVTVCPAGVFVYLPEIRKVTLWIGRCVMCKQCVDVCPTAALQMSDEFLLASYDKYDAKLIYLTPEEAEDIKKKLEEANKAKAEKQASK
Monovalent cation/H+ antiporter subunit C G 117 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MIAFQYLTATIMILLGIYALLYKRNLIKLVLALNLIDSGIHLLLISEGYRMENGIPPTAPIYTGYEGGAMVAPIPQALVLTSIVIGVCVLSLAIALTVNAYRHYGTLDVTKLRRLRG
MBH subunit D 96 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MHISKKKGVRKMNLDMIIQFIVLGGIILSSVLMIVTRDLLVAVLASAAMSLLLSLEFYMLHAPDVAIAEAAVGAGVVTALVMYAISKTERWEREAP
MBH subunit I 115 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MFGYWDPLYFIIVFIIGLILAYLLNLWAKKSGMGTREVGEGTKIFISGEDPEKVIPGFEHLEGYYTGRNTMWGLVNGVKKFFATLKNDHTGLLPDYVSYLLMTTAFILVILLLRG
Mbh13 NADH dehydrogenase subunit M 321 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MKIVYGVIGLILIYIYVSVVSLLFSGIDRKLVARMQRRIGPPILQPFYDFLKLMSKETIIPKTANFMFKAAPILMLATVIALLAYTPLGFPPIFGTKGDIIVFIYLLTLADFFLVVGVMSSGSPYGRIGAARGIALLVSREPAMMLGVFAVMWAISKLGVEKPFSLSSLYEHTIWDFGPVAWVAGVVLIYVFMAWLASEIEVGFFNIPEAEQEIAEGTLVEYSGRYLGIIKLAESIKEFIAASLVVAVLFPWQLNIPGVQGYLINLLLHTLKVFIVLLVSKTIFRTITGRLKISQAVNLLWTRVFTASVIGALLLALGVML
Monovalent cation/H+ antiporter subunit B F 148 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MNEDMGVIVRTNARALIPFIGIFGAYIVTHGHLTPGGGFQGGATIAGAGVLFLIAFGVKAAKEKINKNLYSALEGLGGLVFLGAAMLGLSVAFFYNILWHEGPIFNSSPGTLLSAGFLPIMNLGVGLKVFTGLVSALFALSVFRRWKS
Monovalent cation/H+ antiporter subunit E A 167 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MSFITAFIWAYFLWLVLTAGSKGMLWSTQELIAGLIFASIVGYSTRNIIGEKASRFLNPVKWILFVAYAPVLFWGMVKANLDVAYRVITGKIRPGIVRVPVELENDAQYTILSNSITLTPGTLTVEACPEEKALYVHWINIPEGLEWPENSEPVSGPFEKWARRLGA
MBH subunit E 99 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MKRALGFLSLLVIFASLLVALSPEYGIKFGVGGEDWLKYRYTDNYYIEHGIEEVGGTNIVTDIVFDYRGYDTLGEATVLFTAIAGAVALLRPWRREENE
Monovalent cation/H+ antiporter subunit G C 124 Pyrococcus Furiosus (Strain Atcc 43587 / Dsm 3638 / Jcm 8422 / Vc1) , Pyrococcus Furiosus Com1 MIAYYLIIAFLGISVTFNMLGSIALHRFPDVYTRLHGATKCTTFGTIFAALAVITHAIVKLQATGNPKYLQMAIHSFVAMLALLLTNPVGAHAIAKAAHKTGYLPKRAVVDAYLEKERGEKNES
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-02-17
Deposition Author(s): Li, H.L. , Yu, H.J.