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6CE0

Crystal structure of a hiv-1 clade b tier-3 isolate h078.14 ufo-bg env trimer in complex with broadly neutralizing fabs pgt124 and 35o22 at 4.6 angstrom

PDB DOI: 10.2210/pdb6ce0/pdb

Classification: viral protein/immune system
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2018-02-09
Deposition Author(s): Kumar, S. , Sarkar, A. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.602 Å

6ce0
Literature

Crystal structure of a hiv-1 clade b tier-3 isolate h078.14 ufo-bg env trimer in complex with broadly neutralizing fabs pgt124 and 35o22 at 4.6 angstrom

Kumar, S. , Sarkar, A. , Wilson, I.A.

Primary Citation of Related Structures: 6CE0


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp160 B 140 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGNPDWLPDMTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp160 G 487 Homo Sapiens , Human Immunodeficiency Virus 1 AEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVLLENVTEEFNMWKNSMVEQMHEDIISLWDQSLKPCVKLTPFCVTLNCTNYNGTNGNTTVTNNSTGDGDIKQCSFNITTEIEDKDGSKRRNESALFSKLDLEPINNSNTSYRLIKCNTSVIKQACPKVSFEPIPIHYCAPAGFAILKCNDKRFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENLTNNAKNIIIQLNESVVITCERPNNNTRKRVTLGPGKVLYTTGEIIGNIRKAHCNISKTNWTRTLERIVIKLREQFKNKTIVFNQSSGGDLEIVMHVFNCGGEFFYCNTTQLFNSTYNSTWNYNSTRNTTDSIITLPCRIKQIINRWQEVGKAMYAPPIAGQIRCQSNITGLILTRDGGGNGTNGTEVFRPAGGDMKDNWRSELYKYKVVRIEPLGIAPTKCKRRVVGGGGGSGGGGS
35O22 Heavy chain D 243 Homo Sapiens , Human Immunodeficiency Virus 1 EGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLFQ
35O22 Light chain E 216 Homo Sapiens , Human Immunodeficiency Virus 1 QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
PGT124 Heavy chain H 236 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
PGT124 Light chain L 214 Homo Sapiens , Human Immunodeficiency Virus 1 SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-02-09
Deposition Author(s): Kumar, S. , Sarkar, A. , Wilson, I.A.