6C5V
An anti-gh/gl antibody that neutralizes dual-tropic infection defines a site of vulnerability on epstein-barr virus
PDB DOI: 10.2210/pdb6c5v/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Human Herpesvirus 4
Deposited: 2018-01-16 Deposition Author(s): Gray, M.A. , Mcelrath, M.J. , Mcguire, A.T. , Ortego, M.S. , Pancera, M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Snijder, J. , Stuart, A.B. , Veesler, D. , Weidle, C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 4.8 Å
An anti-gh/gl antibody that neutralizes dual-tropic infection defines a site of vulnerability on epstein-barr virus
Gray, M.A. , Mcelrath, M.J. , Mcguire, A.T. , Ortego, M.S. , Pancera, M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Snijder, J. , Stuart, A.B. , Veesler, D. , Weidle, C.
Primary Citation of Related Structures: 6C5V
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Envelope glycoprotein H | A | 697 | Homo Sapiens , Human Herpesvirus 4 | MDAMKRGLCCVLLLCGAVFVSPSASSLSEVKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVTEDLASMLNRYKLIYKTSGTLGIALAEPVDIPAVSEGSMQVDASKVHPGVISGLNSPACMLSAPLEKQLFYYIGTMLPNTRPHSYVFYQLRCHLSYVALSINGDKFQYTGAMTSKFLMGTYKRVTEKGDEHVLSLVFGKTKDLPDLRGPFSYPSLTSAQSGDYSLVIVTTFVHYANFHNYFVPNLKDMFSRAVTMTAASYARYVLQKLVLLEMKGGCREPELDTETLTTMFEVSVAFFKVGHAVGETGNGCVDLRWLAKSFFELTVLKDIIGICYGATVKGMQSYGLERLAAMLMATVKMEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSYAVDGFLGRLSLEREDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIPKIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLYEERAHGSGSGHHHHHH |
| Envelope glycoprotein L | B | 139 | Homo Sapiens , Human Herpesvirus 4 | MDAMKRGLCCVLLLCGAVFVSPSASWAYPCCHVTQLRAQHLLALENISDIYLVSNQTCDGFSLASLNSPKNGSNQLVISRCANGLNVVSFFISILKRSSSALTGHLRELLTTLETLYGSFSVEDLFGANLNRYAWHRGG |
| Glycoprotein 42 | C | 227 | Homo Sapiens , Human Herpesvirus 4 | MDAMKRGLCCVLLLCGAVFVSPSASGGGRVAAAAITWVPKPNVEVWPVDPPPPVNFNKTAEQEYGDKEVKLPHWTPTLHTFQVPQNYTKANCTYCNTREYTFSYKGCCFYFTKKKHTWNGCFQACAELYPCTYFYGPTPDILPVVTRNLNAIESLWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCTYVSKFSTVPVSHHECSFLKPCLCVSQRSNSGSGSGHHHHHH |
| Antibody Fab AMMO1 heavy chain | H | 226 | Homo Sapiens , Human Herpesvirus 4 | QVQLVQSGADVKKPGASVKVSCKASGYTFIHFGISWVRQAPGQGLEWMGWIDTNNGNTNYAQSLQGRVTMTTDTSTGTAYMELRSLSTDDTAVYFCARALEMGHRSGFPFDYWGQGVLVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC |
| Antibody Fab AMMO1 light chain | L | 216 | Homo Sapiens , Human Herpesvirus 4 | SYELTQPPSVSVAPGQRATITCGGHNIGAKNVHWYQQKPGQAPVLVIQYDSDRPSGIPERFSGSNSGSTATLTISRVEAGDEADYYCQVWDSGRGHPLYVFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2018-01-16 Deposition Author(s): Gray, M.A. , Mcelrath, M.J. , Mcguire, A.T. , Ortego, M.S. , Pancera, M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Snijder, J. , Stuart, A.B. , Veesler, D. , Weidle, C.