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6BSG

Structure of hiv-1 rt complexed with rna/dna hybrid in an rna hydrolysis-off mode

PDB DOI: 10.2210/pdb6bsg/pdb

Classification: viral protein/dna/rna/inhibitor
Organism(s): Human Immunodeficiency Virus 1 , Synthetic Construct

Deposited: 2017-12-03
Deposition Author(s): Kim, M. , Tian, L. , Yang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.44 Å

6bsg
Literature

Structure of hiv-1 rt complexed with rna/dna hybrid in an rna hydrolysis-off mode

Kim, M. , Tian, L. , Yang, W.

Primary Citation of Related Structures: 6BSG


Proteins
Molecule Chains Sequence Length Organism Sequence
REVERSE TRANSCRIPTASE P66 SUBUNIT A 558 Human Immunodeficiency Virus 1 , Synthetic Construct GPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDGTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWVPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAASRETKLGKAGYVTNKGRQKVVTLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIR
REVERSE TRANSCRIPTASE P51 SUBUNIT B 441 Human Immunodeficiency Virus 1 , Synthetic Construct GPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDGTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWVPEWEFVNTPPLVKLWYQLEKEPIVGAETF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*TP*AP*TP*GP*CP*CP*AP*CP*TP*AP*GP*TP*TP*AP*TP*TP*GP*TP*GP*GP*CP*C)-3') d 23 NA GTATGCCACTAGTTATTGTGGCC
RNA (25-MER) r 25 NA GANGGCCACAAUAACUAGUGGCAUA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-12-03
Deposition Author(s): Kim, M. , Tian, L. , Yang, W.