PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6BJV

Cirv p19 protein in complex with sirna

PDB DOI: 10.2210/pdb6bjv/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Carnation Italian Ringspot Virus , Synthetic Construct

Deposited: 2017-11-07
Deposition Author(s): Foss, D.V. , Macrae, I.J. , Pezacki, J.P. , Schirle, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.198 Å

6bjv
Literature

Cirv p19 protein in complex with sirna

Foss, D.V. , Macrae, I.J. , Pezacki, J.P. , Schirle, N.

Primary Citation of Related Structures: 6BJV


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA silencing suppressor p19 A 172 Carnation Italian Ringspot Virus , Synthetic Construct MERAIQGNDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTPVEVESNVSRGCPEGIETFKKESE
RNA silencing suppressor p19 B 172 Carnation Italian Ringspot Virus , Synthetic Construct MERAIQGNDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTPVEVESNVSRGCPEGIETFKKESE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3') c 21 NA UCGAAGUAUUCCGCGUACGUU
RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3') d 21 NA CGUACGCGGAAUACUUCGAUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-11-07
Deposition Author(s): Foss, D.V. , Macrae, I.J. , Pezacki, J.P. , Schirle, N.