PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6B46

Cryo-em structure of type i-f crispr crrna-guided csy surveillance complex with bound anti-crispr protein acrf1

PDB DOI: 10.2210/pdb6b46/pdb

Classification: IMMUNE SYSTEM/HYDROLASE/RNA
Organism(s): Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30

Deposited: 2017-09-25
Deposition Author(s): Bartesaghi, A. , Earl, L. , Falconieri, V. , Fox, T. , Guo, T.W. , Merk, A. , Patel, D.J. , Rao, P. , Subramaniam, S. , Yang, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

6b46
Literature

Cryo-em structure of type i-f crispr crrna-guided csy surveillance complex with bound anti-crispr protein acrf1

Bartesaghi, A. , Earl, L. , Falconieri, V. , Fox, T. , Guo, T.W. , Merk, A. , Patel, D.J. , Rao, P. , Subramaniam, S. , Yang, H.

Primary Citation of Related Structures: 6B46


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated protein Csy3 C 344 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 D 344 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 E 344 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 F 344 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 G 344 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
CRISPR-associated protein Csy3 H 344 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMSKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK
Anti-CRISPR protein AcrF1 I 80 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 GSMKFIKYLSTAHLNYMNIAVYENGSKIKARVENVVNGKSVGARDFDSTEQLESWFYGLPGSGLGRIENAMNEISRRENP
Anti-CRISPR protein AcrF1 J 80 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 GSMKFIKYLSTAHLNYMNIAVYENGSKIKARVENVVNGKSVGARDFDSTEQLESWFYGLPGSGLGRIENAMNEISRRENP
CRISPR-associated endonuclease Cas6/Csy4 L 189 Pseudomonas Aeruginosa , Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage Jbd30 MAMDHYLDIRLRPDPEFPPAQLMSVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWLEGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARALDLPFVTLRSQSTGQHFRLFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence m 60 NA CUAAGAAAUUCACGGCGGGCUUGAUGUCCGCGUCUACCUGGUUCACUGCCGUGUAGGCAG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-09-25
Deposition Author(s): Bartesaghi, A. , Earl, L. , Falconieri, V. , Fox, T. , Guo, T.W. , Merk, A. , Patel, D.J. , Rao, P. , Subramaniam, S. , Yang, H.