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FASTA Sequence PDB Format mmCIF Format
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6B3M

The crystal structure of a broadly-reactive human anti-hemagglutinin stalk antibody (70-1f02) in complex with h5 hemagglutinin

PDB DOI: 10.2210/pdb6b3m/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Unidentified Influenza Virus

Deposited: 2017-09-22
Deposition Author(s): Shore, D.A. , Stevens, J. , Yang, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.92 Å

6b3m
Literature

The crystal structure of a broadly-reactive human anti-hemagglutinin stalk antibody (70-1f02) in complex with h5 hemagglutinin

Shore, D.A. , Stevens, J. , Yang, H.

Primary Citation of Related Structures: 6B3M


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 A 330 Homo Sapiens , Unidentified Influenza Virus DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKKHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKR
Hemagglutinin HA1 E 330 Homo Sapiens , Unidentified Influenza Virus DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKKHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKR
Hemagglutinin HA1 G 330 Homo Sapiens , Unidentified Influenza Virus DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKKHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKR
Hemagglutinin HA1 K 330 Homo Sapiens , Unidentified Influenza Virus DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKKHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKR
Hemagglutinin HA1 Q 330 Homo Sapiens , Unidentified Influenza Virus DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKKHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKR
Hemagglutinin HA1 S 330 Homo Sapiens , Unidentified Influenza Virus DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKKHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKR
Hemagglutinin HA2 B 181 Homo Sapiens , Unidentified Influenza Virus GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISSGRLVPR
Hemagglutinin HA2 F 181 Homo Sapiens , Unidentified Influenza Virus GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISSGRLVPR
Hemagglutinin HA2 H 181 Homo Sapiens , Unidentified Influenza Virus GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISSGRLVPR
Hemagglutinin HA2 L 181 Homo Sapiens , Unidentified Influenza Virus GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISSGRLVPR
Hemagglutinin HA2 R 181 Homo Sapiens , Unidentified Influenza Virus GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISSGRLVPR
Hemagglutinin HA2 T 181 Homo Sapiens , Unidentified Influenza Virus GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISSGRLVPR
70-1F02 Fab Heavy Chain C 221 Homo Sapiens , Unidentified Influenza Virus QVQLVQSGAEVKKPGSSVKVSCRASGGIFRSNAISWVRQAPGQGLEWMGNIIAVFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGPYYYGNSHLDFWGQGTMVTVSSASTKGPSVFPLAPSSWMGNGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
70-1F02 Fab Heavy Chain I 221 Homo Sapiens , Unidentified Influenza Virus QVQLVQSGAEVKKPGSSVKVSCRASGGIFRSNAISWVRQAPGQGLEWMGNIIAVFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGPYYYGNSHLDFWGQGTMVTVSSASTKGPSVFPLAPSSWMGNGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
70-1F02 Fab Heavy Chain M 221 Homo Sapiens , Unidentified Influenza Virus QVQLVQSGAEVKKPGSSVKVSCRASGGIFRSNAISWVRQAPGQGLEWMGNIIAVFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGPYYYGNSHLDFWGQGTMVTVSSASTKGPSVFPLAPSSWMGNGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
70-1F02 Fab Heavy Chain O 221 Homo Sapiens , Unidentified Influenza Virus QVQLVQSGAEVKKPGSSVKVSCRASGGIFRSNAISWVRQAPGQGLEWMGNIIAVFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGPYYYGNSHLDFWGQGTMVTVSSASTKGPSVFPLAPSSWMGNGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
70-1F02 Fab Heavy Chain V 221 Homo Sapiens , Unidentified Influenza Virus QVQLVQSGAEVKKPGSSVKVSCRASGGIFRSNAISWVRQAPGQGLEWMGNIIAVFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGPYYYGNSHLDFWGQGTMVTVSSASTKGPSVFPLAPSSWMGNGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
70-1F02 Fab Heavy Chain Y 221 Homo Sapiens , Unidentified Influenza Virus QVQLVQSGAEVKKPGSSVKVSCRASGGIFRSNAISWVRQAPGQGLEWMGNIIAVFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGPYYYGNSHLDFWGQGTMVTVSSASTKGPSVFPLAPSSWMGNGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
70-1F02 Fab Light Chain P 215 Homo Sapiens , Unidentified Influenza Virus EIVLTQSPGTLSLSPGERATLSCRASQSVSSNYLAWFQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLAISRLEPEDFAVYYCQQYGTSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
70-1F02 Fab Light Chain U 215 Homo Sapiens , Unidentified Influenza Virus EIVLTQSPGTLSLSPGERATLSCRASQSVSSNYLAWFQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLAISRLEPEDFAVYYCQQYGTSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
70-1F02 Fab Light Chain J 215 Homo Sapiens , Unidentified Influenza Virus EIVLTQSPGTLSLSPGERATLSCRASQSVSSNYLAWFQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLAISRLEPEDFAVYYCQQYGTSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
70-1F02 Fab Light Chain D 215 Homo Sapiens , Unidentified Influenza Virus EIVLTQSPGTLSLSPGERATLSCRASQSVSSNYLAWFQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLAISRLEPEDFAVYYCQQYGTSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
70-1F02 Fab Light Chain W 215 Homo Sapiens , Unidentified Influenza Virus EIVLTQSPGTLSLSPGERATLSCRASQSVSSNYLAWFQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLAISRLEPEDFAVYYCQQYGTSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
70-1F02 Fab Light Chain N 215 Homo Sapiens , Unidentified Influenza Virus EIVLTQSPGTLSLSPGERATLSCRASQSVSSNYLAWFQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLAISRLEPEDFAVYYCQQYGTSPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-09-22
Deposition Author(s): Shore, D.A. , Stevens, J. , Yang, H.