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6B3K

Crystal structure of mutant spinach rna aptamer in complex with fab bl3-6

PDB DOI: 10.2210/pdb6b3k/pdb

Classification: immune system/rna
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2017-09-22
Deposition Author(s): Dasgupta, S. , Koirala, D. , Piccirilli, J.A. , Shelke, S.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.09 Å

6b3k
Literature

Crystal structure of mutant spinach rna aptamer in complex with fab bl3-6

Dasgupta, S. , Koirala, D. , Piccirilli, J.A. , Shelke, S.A.

Primary Citation of Related Structures: 6B3K


Proteins
Molecule Chains Sequence Length Organism Sequence
Heavy chain of Fab BL3-6 H 225 Mus Musculus , Synthetic Construct EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Light chain of Fab BL3-6 L 215 Mus Musculus , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (83-MER),RNA (83-MER) r 83 NA GACGCGACCGAAAUGGUGAAGGACGGGUCCAGUGCGAGACCCGCACUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-09-22
Deposition Author(s): Dasgupta, S. , Koirala, D. , Piccirilli, J.A. , Shelke, S.A.