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6AM0

Crystal structure of k. lactis edc1-dcp1-dcp2-edc3 decapping complex with synthetic cap substrate analog

PDB DOI: 10.2210/pdb6am0/pdb

Classification: TRANSLATION
Organism(s): Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-08-08
Deposition Author(s): Gross, J.D. , Mugridge, J.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.84 Å

6am0
Literature

Crystal structure of k. lactis edc1-dcp1-dcp2-edc3 decapping complex with synthetic cap substrate analog

Gross, J.D. , Mugridge, J.S.

Primary Citation of Related Structures: 6AM0


Proteins
Molecule Chains Sequence Length Organism Sequence
KLLA0F23980p A 275 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSLPLLRPFETVSLENAVEDLVVRFILNVPPEDLSTVERVLFHFEEASWFYTDFVKLMNPYLPNLSIKSFSKIVIDICPLIWNWDITPENALVKFSNYKKTIPVRGAAIFNDSLSKILLLRGINSKHWSFPRGKIGKDEDDVACCIREVKEQTGFDLTGFIDADQYVERNMNGKNFKIFLVKGVPEDFEFKPEHKNEIQAIEWKDFKKLSKAITKNEGSAKVFLVNSMIRPLSLYVKNEKRAKDENKLKLYAEEHLKSILGLNKKENKIVLDAGR
KLLA0F23980p E 275 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSLPLLRPFETVSLENAVEDLVVRFILNVPPEDLSTVERVLFHFEEASWFYTDFVKLMNPYLPNLSIKSFSKIVIDICPLIWNWDITPENALVKFSNYKKTIPVRGAAIFNDSLSKILLLRGINSKHWSFPRGKIGKDEDDVACCIREVKEQTGFDLTGFIDADQYVERNMNGKNFKIFLVKGVPEDFEFKPEHKNEIQAIEWKDFKKLSKAITKNEGSAKVFLVNSMIRPLSLYVKNEKRAKDENKLKLYAEEHLKSILGLNKKENKIVLDAGR
KLLA0E01827p B 190 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSMSTETLEIYRKALNFNVIARYDPKIKQLLFHTPHATVYKWGDDNWNKLEYQGVLAIYLRDVGDKEAILPEVSSYDDTITGQQSEANTPHVLTGHDIYNYGLIIMNRINPDNFSLAIAPNSVLNKRKLFAPNREEELEPMKVEVRDDLVMIKTLKKEVYGIWVHTPEDRQNIYELIKYLLENEPTDSFT
KLLA0E01827p F 190 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSMSTETLEIYRKALNFNVIARYDPKIKQLLFHTPHATVYKWGDDNWNKLEYQGVLAIYLRDVGDKEAILPEVSSYDDTITGQQSEANTPHVLTGHDIYNYGLIIMNRINPDNFSLAIAPNSVLNKRKLFAPNREEELEPMKVEVRDDLVMIKTLKKEVYGIWVHTPEDRQNIYELIKYLLENEPTDSFT
KLLA0A01474p C 26 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HSKCYAGATFATEAPQVTTLPKPSFV
KLLA0A01474p G 26 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HSKCYAGATFATEAPQVTTLPKPSFV
KLLA0A11308p D 66 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MLNFKGYQIEIELKDGKRITGTLKQVSPKSLTLTDAVFQDGGVSPVFKIKADKLYDLKVLKLPPNA
KLLA0A11308p H 66 Canine Parvovirus Type 2 (Isolate Dog/United States/Cpv-B/1978) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MLNFKGYQIEIELKDGKRITGTLKQVSPKSLTLTDAVFQDGGVSPVFKIKADKLYDLKVLKLPPNA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-08-08
Deposition Author(s): Gross, J.D. , Mugridge, J.S.