PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5ZUD

Fit r10 fab coordinates into the cryo-em of ev71 in complex with d6

PDB DOI: 10.2210/pdb5zud/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Enterovirus A71 , Mus Musculoides

Deposited: 2018-05-07
Deposition Author(s): Wang, N. , Wang, X. , Zhu, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.9 Å

5zud
Literature

Fit r10 fab coordinates into the cryo-em of ev71 in complex with d6

Wang, N. , Wang, X. , Zhu, L.

Primary Citation of Related Structures: 5ZUD


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 A 297 Enterovirus A71 , Mus Musculoides GDRVADVIESSIEDSSSRALTHALPAPTGQNTQVSSHRLDTGKVPALQAAEIGASSNASDESMIETRCVLNSHSTAETTLDSFFSRAGLVGEIDLPLKGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGAMPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL
VP2 B 245 Enterovirus A71 , Mus Musculoides SDRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDTHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQAVTQ
VP3 C 242 Enterovirus A71 , Mus Musculoides GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRNGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTHYRAHARDGVFDYYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMKLCKDASDILQTGTIQ
R10 ANTIBODY LIGHT CHAIN D 212 Enterovirus A71 , Mus Musculoides DIVLTQSPAIMSASPGEKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSRLAFGVPGRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
R10 ANTIBODY HEAVY CHAIN E 220 Enterovirus A71 , Mus Musculoides EVKLVESGGGSVKPGGSLKLSCAASGFSFSTYGMSWVRQTPEKRLEWVATISGGGGYTYYPDSVKGRFTISRDNARNILYLQMSSLRSGDTAMYYCARRVTTVAEYYFDYWGQGTTLTVSSPKTTPPSVYPLAPAAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-05-07
Deposition Author(s): Wang, N. , Wang, X. , Zhu, L.